RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ZNF202O95125 648 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 ATG7O95352 703 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 CST5P28325 142 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-216ENST00000468949 MFSD10Q14728 455 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 UGCGQ16739 394 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 TMEM119Q4V9L6 283 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 XKR9Q5GH70 373 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 HYIQ5T013 277 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 TMEM63BQ5T3F8 832 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 LHX8Q68G74 356 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 B3GNT9Q6UX72 402 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 USP49Q70CQ1 688 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 SV2BQ7L1I2 683 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 C4orf19Q8IY42 314 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 EXOC8Q8IYI6 725 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 AFAP1L1Q8TED9 768 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 PIGOQ8TEQ8 1089 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 RAD54LQ92698 747 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 CCDC47Q96A33 483 aaKnown RBP9.05□□□□□ -0.96
HDAC6-216ENST00000468949 CEP170P1Q96L14 293 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 GLT1D1Q96MS3 346 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 HSD17B14Q9BPX1 270 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 MMTAG2Q9BU76 263 aaKnown RBP9.05□□□□□ -0.96
HDAC6-216ENST00000468949 NUP62CLQ9H1M0 184 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 TUT1Q9H6E5 874 aaKnown RBP9.05□□□□□ -0.96
HDAC6-216ENST00000468949 C11orf49Q9H6J7 331 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 BCAS3Q9H6U6 928 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 DACT1Q9NYF0 836 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 NR2E3Q9Y5X4 410 aa9.05□□□□□ -0.96
HDAC6-216ENST00000468949 MKI67P46013 3256 aaKnown RBP9.05□□□□□ -0.96
HDAC6-216ENST00000468949 MYADML2A6NDP7 307 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 HBP1O60381 514 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 USO1O60763 962 aaKnown RBP9.04□□□□□ -0.96
HDAC6-216ENST00000468949 ADAMTS4O75173 837 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 TBCAO75347 108 aaKnown RBP9.04□□□□□ -0.96
HDAC6-216ENST00000468949 NR1I2O75469 434 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 SLITRK3O94933 977 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 LYPLA2O95372 231 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 EYA4O95677 639 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 F2P00734 622 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 ASGR1P07306 291 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 SLFN14P0C7P3 912 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 PLA2G4BP0C869 781 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 SPATA31C1P0DKV0 1188 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 GNAT1P11488 350 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 COL6A1P12109 1028 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 LIG1P18858 919 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 PSEN2P49810 448 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 POLGP54098 1239 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-216ENST00000468949 IGBP1P78318 339 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 TBC1D8BQ0IIM8 1120 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 PPFIA1Q13136 1202 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 GRB10Q13322 594 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 LRRC41Q15345 812 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 KCNA10Q16322 511 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 KIAA0753Q2KHM9 967 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 MTERF2Q49AM1 385 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 FAM47CQ5HY64 1035 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 PLA2G4FQ68DD2 849 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 GPBP1Q86WP2 473 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 C7orf31Q8N865 590 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 ATP8B4Q8TF62 1192 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 SLC7A3Q8WY07 619 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 DPF3Q92784 378 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 JPH2Q9BR39 696 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-216ENST00000468949 TSEN34Q9BSV6 310 aaKnown RBP9.04□□□□□ -0.96
HDAC6-216ENST00000468949 BHMT2Q9H2M3 363 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 TNMDQ9H2S6 317 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 ANKEF1Q9NU02 776 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 SERTAD1Q9UHV2 236 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 HPSEQ9Y251 543 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 PPME1Q9Y570 386 aa9.04□□□□□ -0.96
HDAC6-216ENST00000468949 MAFBQ9Y5Q3 323 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-216ENST00000468949 TCHHQ07283 1943 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 IGKV6D-21A0A0A0MT36 114 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 FAM237AA0A1B0GTK4 181 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 E9PMD0 336 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 H0YGN5 161 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 CTAGE5O15320 804 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 EVI5O60447 810 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 SMC2O95347 1197 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 XRCC6P12956 609 aaKnown RBP eCLIP9.03□□□□□ -0.96
HDAC6-216ENST00000468949 HOXD8P13378 290 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-216ENST00000468949 RFC5P40937 340 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 AFMP43652 599 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 ASIC1P78348 528 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 PURAQ00577 322 aaKnown RBP9.03□□□□□ -0.96
HDAC6-216ENST00000468949 MCM6Q14566 821 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 POSTNQ15063 836 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 PLCB4Q15147 1175 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 KLHL40Q2TBA0 621 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 ZNF484Q5JVG2 852 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 CCDC183Q5T5S1 534 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 CAVIN1Q6NZI2 390 aaKnown RBP9.03□□□□□ -0.96
HDAC6-216ENST00000468949 CXCL17Q6UXB2 119 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 KRBA2Q6ZNG9 492 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 FMR1NBQ8N0W7 255 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-216ENST00000468949 RETREG2Q8NC44 543 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 TIGD1Q96MW7 591 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 PNMA5Q96PV4 448 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms