RNA–Protein interactions for RNA: ENST00000468359.1

CDCA7-207, Transcript of cell division cycle associated 7, humanhuman

TSL 3

Gene CDCA7, Length 906 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-207ENST00000468359 CATIPQ7Z7H3 387 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 RAB11FIP4Q86YS3 637 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 SAMD3Q8N6K7 520 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 PHOSPHO2Q8TCD6 241 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 NSUN6Q8TEA1 469 aaKnown RBP9.43□□□□□ -0.9
CDCA7-207ENST00000468359 ATXN2LQ8WWM7 1075 aaKnown RBP9.43□□□□□ -0.9
CDCA7-207ENST00000468359 TBC1D5Q92609 795 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 COPS5Q92905 334 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 MTMR8Q96EF0 704 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 TAAR1Q96RJ0 339 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 NKX2-4Q9H2Z4 354 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 CPVLQ9H3G5 476 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 PRDM12Q9H4Q4 367 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 RAB6BQ9NRW1 208 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 MAP3K20Q9NYL2 800 aaKnown RBP9.43□□□□□ -0.9
CDCA7-207ENST00000468359 COL20A1Q9P218 1284 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 SLC12A7Q9Y666 1083 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 KIAA1217Q5T5P2 1943 aa9.43□□□□□ -0.9
CDCA7-207ENST00000468359 GOLGA8AA7E2F4 631 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 ZBTB43O43298 467 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 EIF3JO75822 258 aaKnown RBP9.42□□□□□ -0.9
CDCA7-207ENST00000468359 IL2RAP01589 272 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 PARP1P09874 1014 aaKnown RBP9.42□□□□□ -0.9
CDCA7-207ENST00000468359 CALM1P0DP23 149 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 CALM2P0DP24 149 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 CALM3P0DP25 149 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 ATP2A2P16615 1042 aaKnown RBP9.42□□□□□ -0.9
CDCA7-207ENST00000468359 METAP2P50579 478 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDCA7-207ENST00000468359 HSD17B4P51659 736 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 CENPCQ03188 943 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 ARHGAP1Q07960 439 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 RBL2Q08999 1139 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 LBRQ14739 615 aaKnown RBP9.42□□□□□ -0.9
CDCA7-207ENST00000468359 STXBP2Q15833 593 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 QRICH1Q2TAL8 776 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 SYNE3Q6ZMZ3 975 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 FBXO11Q86XK2 927 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 KAT2BQ92831 832 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 CTAGE1Q96RT6 745 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 RMDN3Q96TC7 470 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 MAP3K14Q99558 947 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 JMJD4Q9H9V9 463 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 DDX41Q9UJV9 622 aaKnown RBP9.42□□□□□ -0.9
CDCA7-207ENST00000468359 TPCN1Q9ULQ1 816 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 NAP1L2Q9ULW6 460 aaPredicted RBP9.42□□□□□ -0.9
CDCA7-207ENST00000468359 MRPL11Q9Y3B7 192 aaKnown RBP9.42□□□□□ -0.9
CDCA7-207ENST00000468359 XIRP2A4UGR9 3374 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
CDCA7-207ENST00000468359 SCN5AQ14524 2016 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 CNTNAP5Q8WYK1 1306 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 PALM3A6NDB9 673 aaPredicted RBP9.41□□□□□ -0.9
CDCA7-207ENST00000468359 OPLAHO14841 1288 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 GH1P01241 217 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 MMP3P08254 477 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 ACTN1P12814 892 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 HOXD8P13378 290 aaPredicted RBP9.41□□□□□ -0.9
CDCA7-207ENST00000468359 PDIA3P30101 505 aaKnown RBP9.41□□□□□ -0.9
CDCA7-207ENST00000468359 MAP2K3P46734 347 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 MCM2P49736 904 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 RABGGTBP53611 331 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 BFSP2Q13515 415 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 ME3Q16798 604 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 RTN1Q16799 776 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 LY6KQ17RY6 165 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 BEND7Q8N7W2 519 aaPredicted RBP9.41□□□□□ -0.9
CDCA7-207ENST00000468359 RETREG2Q8NC44 543 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 CTCFLQ8NI51 663 aaPredicted RBP9.41□□□□□ -0.9
CDCA7-207ENST00000468359 CAGE1Q8TC20 777 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 AFG1LQ8WV93 481 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 ZNF274Q96GC6 653 aaPredicted RBP9.41□□□□□ -0.9
CDCA7-207ENST00000468359 SLC9A7Q96T83 725 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 AMNQ9BXJ7 453 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
CDCA7-207ENST00000468359 MAD2L2Q9UI95 211 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 DOLKQ9UPQ8 538 aa9.41□□□□□ -0.9
CDCA7-207ENST00000468359 MYO9BQ13459 2157 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 REV3LO60673 3130 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 HAS3O00219 553 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 PFKFB2O60825 505 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 BAIAP3O94812 1187 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 PLEKHA8P1O95397 391 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 PARNO95453 639 aaKnown RBP9.4□□□□□ -0.9
CDCA7-207ENST00000468359 MYOGP15173 224 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 CDC27P30260 824 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 KIF5BP33176 963 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 ST3GAL1Q11201 340 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 SCRN1Q12765 414 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 STK3Q13188 491 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 GPNMBQ14956 572 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 PTGISQ16647 500 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 DGKDQ16760 1214 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 FAM47CQ5HY64 1035 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 ARHGEF16Q5VV41 709 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 TMEM214Q6NUQ4 689 aaKnown RBP9.4□□□□□ -0.9
CDCA7-207ENST00000468359 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 DEFB128Q7Z7B8 93 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 PGBD3Q8N328 593 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 STAG2Q8N3U4 1231 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 AFAP1L1Q8TED9 768 aa9.4□□□□□ -0.9
CDCA7-207ENST00000468359 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms