RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 MGAT3Q09327 533 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 NBR1Q14596 966 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 MBTPS1Q14703 1052 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 LTBP2Q14767 1821 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 TMEM266Q2M3C6 531 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 ANO5Q75V66 913 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 DYDC2Q96IM9 177 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 RNPC3Q96LT9 517 aaKnown RBP22.44■■□□□ 1.18
NPHP4-206ENST00000468253 CEP89Q96ST8 783 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 POLR3CQ9BUI4 534 aaPredicted RBP22.44■■□□□ 1.18
NPHP4-206ENST00000468253 RAB34Q9BZG1 259 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 ZSCAN16Q9H4T2 348 aaPredicted RBP22.44■■□□□ 1.18
NPHP4-206ENST00000468253 MTMR6Q9Y217 621 aa22.44■■□□□ 1.18
NPHP4-206ENST00000468253 KDM3AQ9Y4C1 1321 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 STX6O43752 255 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 BAIAP3O94812 1187 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 BMP15O95972 392 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 MUTP22033 750 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 MRPS6P82932 125 aaKnown RBP22.43■■□□□ 1.18
NPHP4-206ENST00000468253 CDC42EP1Q00587 391 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 ARL6IP4Q66PJ3 421 aaKnown RBP22.43■■□□□ 1.18
NPHP4-206ENST00000468253 CNKSR3Q6P9H4 555 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 TRMT1LQ7Z2T5 733 aaKnown RBP22.43■■□□□ 1.18
NPHP4-206ENST00000468253 TPH2Q8IWU9 490 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 LINC01465Q8N7H1 131 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 USP38Q8NB14 1042 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 ERMNQ8TAM6 284 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 JPH2Q9BR39 696 aaPredicted RBP22.43■■□□□ 1.18
NPHP4-206ENST00000468253 LXNQ9BS40 222 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 TUFT1Q9NNX1 390 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 FOXD4L1Q9NU39 408 aa22.43■■□□□ 1.18
NPHP4-206ENST00000468253 KAT6AQ92794 2004 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 TRIP12Q14669 1992 aaPredicted RBP22.42■■□□□ 1.18
NPHP4-206ENST00000468253 IGKV6-21A0A0C4DH24 114 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.42■■□□□ 1.18
NPHP4-206ENST00000468253 ABHD14A-ACY1A0A1B0GW23 586 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.42■■□□□ 1.18
NPHP4-206ENST00000468253 EFCAB14O75071 495 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 ATP2C1P98194 919 aaPredicted RBP22.42■■□□□ 1.18
NPHP4-206ENST00000468253 TBC1D8BQ0IIM8 1120 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 PLEKHG4Q58EX7 1191 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 GPR153Q6NV75 609 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 EFCAB12Q6NXP0 572 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 DTHD1Q6ZMT9 781 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 OTOP2Q7RTS6 562 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 IGSF22Q8N9C0 903 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 ZBTB10Q96DT7 871 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 CELF4Q9BZC1 486 aaKnown RBP22.42■■□□□ 1.18
NPHP4-206ENST00000468253 FAM49AQ9H0Q0 323 aaPredicted RBP22.42■■□□□ 1.18
NPHP4-206ENST00000468253 ANKEF1Q9NU02 776 aa22.42■■□□□ 1.18
NPHP4-206ENST00000468253 WRAP73Q9P2S5 460 aaPredicted RBP22.42■■□□□ 1.18
NPHP4-206ENST00000468253 MAFO75444 373 aaPredicted RBP22.41■■□□□ 1.18
NPHP4-206ENST00000468253 SPATA31C1P0DKV0 1188 aa22.41■■□□□ 1.18
NPHP4-206ENST00000468253 RPA1P27694 616 aa22.41■■□□□ 1.18
NPHP4-206ENST00000468253 YWHABP31946 246 aaKnown RBP22.41■■□□□ 1.18
NPHP4-206ENST00000468253 CTTNQ14247 550 aaKnown RBP22.41■■□□□ 1.18
NPHP4-206ENST00000468253 METTL13Q8N6R0 699 aa22.41■■□□□ 1.18
NPHP4-206ENST00000468253 PHOSPHO2Q8TCD6 241 aa22.41■■□□□ 1.18
NPHP4-206ENST00000468253 CYP26B1Q9NR63 512 aa22.41■■□□□ 1.18
NPHP4-206ENST00000468253 SEPT9Q9UHD8 586 aaPredicted RBP22.41■■□□□ 1.18
NPHP4-206ENST00000468253 CDY2AQ9Y6F7 541 aa22.41■■□□□ 1.18
NPHP4-206ENST00000468253 POTEMA6NI47 508 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 M0QZ92 97 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 CTSHP09668 335 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 DNM2P50570 870 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 SMAD3P84022 425 aaKnown RBP22.4■■□□□ 1.18
NPHP4-206ENST00000468253 RESTQ13127 1097 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 IKBKEQ14164 716 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 FERMT3Q86UX7 667 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 CATSPER3Q86XQ3 398 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 SEPT8Q92599 483 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 APBB2Q92870 758 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 LRWD1Q9UFC0 647 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 TRPV2Q9Y5S1 764 aa22.4■■□□□ 1.18
NPHP4-206ENST00000468253 FXR1P51114 621 aaKnown RBP eCLIP22.39■■□□□ 1.17
NPHP4-206ENST00000468253 CYP4A11Q02928 519 aa22.39■■□□□ 1.17
NPHP4-206ENST00000468253 MTERF2Q49AM1 385 aa22.39■■□□□ 1.17
NPHP4-206ENST00000468253 FBXO47Q5MNV8 452 aa22.39■■□□□ 1.17
NPHP4-206ENST00000468253 DBF4BQ8NFT6 615 aa22.39■■□□□ 1.17
NPHP4-206ENST00000468253 CEP170P1Q96L14 293 aa22.39■■□□□ 1.17
NPHP4-206ENST00000468253 NACC1Q96RE7 527 aa22.39■■□□□ 1.17
NPHP4-206ENST00000468253 CXXC1Q9P0U4 656 aaPredicted RBP22.39■■□□□ 1.17
NPHP4-206ENST00000468253 SLC4A7Q9Y6M7 1214 aa22.39■■□□□ 1.17
NPHP4-206ENST00000468253 RFC5P40937 340 aa22.38■■□□□ 1.17
NPHP4-206ENST00000468253 CRYBB1P53674 252 aaPredicted RBP22.38■■□□□ 1.17
NPHP4-206ENST00000468253 IL17AQ16552 155 aa22.38■■□□□ 1.17
NPHP4-206ENST00000468253 HAUS3Q68CZ6 603 aa22.38■■□□□ 1.17
NPHP4-206ENST00000468253 KCTD17Q8N5Z5 321 aa22.38■■□□□ 1.17
NPHP4-206ENST00000468253 MAP7D2Q96T17 732 aa22.38■■□□□ 1.17
NPHP4-206ENST00000468253 DHX33Q9H6R0 707 aaKnown RBP22.38■■□□□ 1.17
NPHP4-206ENST00000468253 SUGCTQ9HAC7 445 aa22.38■■□□□ 1.17
NPHP4-206ENST00000468253 MYH9P35579 1960 aaKnown RBP22.38■■□□□ 1.17
NPHP4-206ENST00000468253 GAS2O43903 313 aaKnown RBP22.37■■□□□ 1.17
NPHP4-206ENST00000468253 GPR32O75388 356 aa22.37■■□□□ 1.17
NPHP4-206ENST00000468253 NPEPPSP55786 919 aa22.37■■□□□ 1.17
NPHP4-206ENST00000468253 BECN1Q14457 450 aa22.37■■□□□ 1.17
NPHP4-206ENST00000468253 LPIN1Q14693 890 aa22.37■■□□□ 1.17
NPHP4-206ENST00000468253 TSHZ1Q6ZSZ6 1077 aa22.37■■□□□ 1.17
NPHP4-206ENST00000468253 SLC7A3Q8WY07 619 aa22.37■■□□□ 1.17
NPHP4-206ENST00000468253 DBR1Q9UK59 544 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms