RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 KIF16BQ96L93 1317 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 F8W031 263 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-212ENST00000466845 BOLA2-SMG1P6H3BVE0 249 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 hCG_1984214I3L0E3 225 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 STXBP3O00186 592 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 BUB1BO60566 1050 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-212ENST00000466845 TPM3P06753 285 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 GLI4P10075 376 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 NCAM1P13591 858 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 PI3P19957 117 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 OAS2P29728 719 aaKnown RBP6.6□□□□□ -1.35
LRCH3-212ENST00000466845 AFF3P51826 1226 aaKnown RBP6.6□□□□□ -1.35
LRCH3-212ENST00000466845 EPHB3P54753 998 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 CCDC15Q0P6D6 951 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 TMED1Q13445 227 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 RASA3Q14644 834 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 SSPNQ14714 243 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 HYIQ5T013 277 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 KIAA1614Q5VZ46 1190 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 C11orf74Q86VG3 221 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 SNX32Q86XE0 403 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 MCF2L2Q86YR7 1114 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 IGDCC3Q8IVU1 814 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 PGBD4Q96DM1 585 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 TSPAN17Q96FV3 270 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 NELL2Q99435 816 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 LZTS2Q9BRK4 669 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 MCMBPQ9BTE3 642 aa6.6□□□□□ -1.35
LRCH3-212ENST00000466845 NGRNQ9NPE2 291 aaKnown RBP6.6□□□□□ -1.35
LRCH3-212ENST00000466845 PTPRGP23470 1445 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 TNIKQ9UKE5 1360 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 CTTNBP2Q8WZ74 1663 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 SMAD7O15105 426 aaKnown RBP6.59□□□□□ -1.35
LRCH3-212ENST00000466845 BBOX1O75936 387 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 BAIAP3O94812 1187 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 KCNH1O95259 989 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 ENPP1P22413 925 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 HOXC12P31275 282 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 SERINC3Q13530 473 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 TRIM29Q14134 588 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 BRDTQ58F21 947 aaPredicted RBP6.59□□□□□ -1.35
LRCH3-212ENST00000466845 TSHZ3Q63HK5 1081 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 E4F1Q66K89 784 aaPredicted RBP6.59□□□□□ -1.35
LRCH3-212ENST00000466845 FAM129CQ86XR2 697 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 TRIM59Q8IWR1 403 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.59□□□□□ -1.35
LRCH3-212ENST00000466845 FAM167BQ9BTA0 163 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.59□□□□□ -1.35
LRCH3-212ENST00000466845 TMX1Q9H3N1 280 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 RMI1Q9H9A7 625 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 PCDH18Q9HCL0 1135 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 PARD6AQ9NPB6 346 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 LUZP4Q9P127 313 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 MAPKBP1O60336 1514 aa6.59□□□□□ -1.35
LRCH3-212ENST00000466845 KIF13AQ9H1H9 1805 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 SASH1O94885 1247 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 CPP00450 1065 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 IGFBP6P24592 240 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 HOXD10P28358 340 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 STIP1P31948 543 aaKnown RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 GTF2A2P52657 109 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 PRR5P85299 388 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 EXOSC10Q01780 885 aaKnown RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 MORC3Q14149 939 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 PPP2R5BQ15173 497 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 PARP10Q53GL7 1025 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 COBLL1Q53SF7 1204 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 WDR45BQ5MNZ6 344 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 FAM83BQ5T0W9 1011 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 C14orf80Q86SX3 495 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 FAM178BQ8IXR5 827 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 ELOA2Q8IYF1 753 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 TMEFF1Q8IYR6 380 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 SPICE1Q8N0Z3 855 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 MARCH10Q8NA82 808 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 PPHLN1Q8NEY8 458 aaKnown RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 ERCC4Q92889 916 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 MRGPRX3Q96LB0 322 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 GPR101Q96P66 508 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 SPAG5Q96R06 1193 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 MAP7D2Q96T17 732 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 NKX2-4Q9H2Z4 354 aa6.58□□□□□ -1.36
LRCH3-212ENST00000466845 ZHX1Q9UKY1 873 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 R3HCC1Q9Y3T6 440 aaKnown RBP6.58□□□□□ -1.36
LRCH3-212ENST00000466845 CDKN1CP49918 316 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-212ENST00000466845 GTF2IRD2BQ6EKJ0 949 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 LILRA6Q6PI73 481 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 CPLX2Q6PUV4 134 aaKnown RBP6.57□□□□□ -1.36
LRCH3-212ENST00000466845 DAAM2Q86T65 1068 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 GTF2IRD2Q86UP8 949 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 RASSF3Q86WH2 238 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 SP8Q8IXZ3 490 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 NKAIN3Q8N8D7 197 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 LINC01356Q8N9X3 169 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 MNS1Q8NEH6 495 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 USP33Q8TEY7 942 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 CPA5Q8WXQ8 436 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 TEKT1Q969V4 418 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 SYAP1Q96A49 352 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms