RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 PCDHB7Q9Y5E2 793 aa19.82■□□□□ 0.76
COL7A1-206ENST00000466591 IGKV6D-21A0A0A0MT36 114 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 GPR182O15218 404 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 CDKL5O76039 1030 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 BMPR1AP36894 532 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 LRCH2Q5VUJ6 765 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 PPP2R3CQ969Q6 453 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 LARP6Q9BRS8 491 aaKnown RBP19.81■□□□□ 0.76
COL7A1-206ENST00000466591 TEKT3Q9BXF9 490 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 NRBP2Q9NSY0 501 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 AKT3Q9Y243 479 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 FAM50BQ9Y247 325 aa19.81■□□□□ 0.76
COL7A1-206ENST00000466591 DHX15O43143 795 aaKnown RBP19.8■□□□□ 0.76
COL7A1-206ENST00000466591 XBP1P17861 261 aa19.8■□□□□ 0.76
COL7A1-206ENST00000466591 SSTR3P32745 418 aaPredicted RBP19.8■□□□□ 0.76
COL7A1-206ENST00000466591 USP11P51784 963 aa19.8■□□□□ 0.76
COL7A1-206ENST00000466591 NTRK3Q16288 839 aa19.8■□□□□ 0.76
COL7A1-206ENST00000466591 TCEAL5Q5H9L2 206 aa19.8■□□□□ 0.76
COL7A1-206ENST00000466591 CMTR2Q8IYT2 770 aaKnown RBP19.8■□□□□ 0.76
COL7A1-206ENST00000466591 LMAN2LQ9H0V9 348 aa19.8■□□□□ 0.76
COL7A1-206ENST00000466591 DISC1Q9NRI5 854 aa19.8■□□□□ 0.76
COL7A1-206ENST00000466591 CLDND1Q9NY35 253 aa19.8■□□□□ 0.76
COL7A1-206ENST00000466591 PCDHA4Q9UN74 947 aa19.8■□□□□ 0.76
COL7A1-206ENST00000466591 COL4A6Q14031 1691 aa19.79■□□□□ 0.76
COL7A1-206ENST00000466591 MAGEB2O15479 319 aa19.79■□□□□ 0.76
COL7A1-206ENST00000466591 DGKIO75912 1065 aa19.79■□□□□ 0.76
COL7A1-206ENST00000466591 KIZQ2M2Z5 673 aa19.79■□□□□ 0.76
COL7A1-206ENST00000466591 PUS10Q3MIT2 529 aaKnown RBP19.79■□□□□ 0.76
COL7A1-206ENST00000466591 TBCKQ8TEA7 893 aa19.79■□□□□ 0.76
COL7A1-206ENST00000466591 ZNF274Q96GC6 653 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-206ENST00000466591 PLVAPQ9BX97 442 aa19.79■□□□□ 0.76
COL7A1-206ENST00000466591 C1QTNF1Q9BXJ1 281 aa19.79■□□□□ 0.76
COL7A1-206ENST00000466591 MAFBQ9Y5Q3 323 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-206ENST00000466591 KDM3AQ9Y4C1 1321 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 RALGAPA2Q2PPJ7 1873 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 NLRC5Q86WI3 1866 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 NCK2O43639 380 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 MARCH6O60337 910 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 VTNP04004 478 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 SFNP31947 248 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 CIITAP33076 1130 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 JAK3P52333 1124 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 TOB2Q14106 344 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-206ENST00000466591 LEXMQ3ZCV2 418 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 PTCRAQ6ISU1 281 aaPredicted RBP19.78■□□□□ 0.76
COL7A1-206ENST00000466591 KIAA0319LQ8IZA0 1049 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 BLIDQ8IZY5 108 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 CRYGNQ8WXF5 182 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 OSMRQ99650 979 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 TM6SF1Q9BZW5 370 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 AAASQ9NRG9 546 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 C1orf112Q9NSG2 853 aa19.78■□□□□ 0.76
COL7A1-206ENST00000466591 NOC2LQ9Y3T9 749 aaKnown RBP19.78■□□□□ 0.76
COL7A1-206ENST00000466591 H3BQ06 376 aaPredicted RBP19.77■□□□□ 0.76
COL7A1-206ENST00000466591 ADAMTS3O15072 1205 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 C22orf31O95567 290 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 OATP04181 439 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 SARSP49591 514 aaKnown RBP19.77■□□□□ 0.76
COL7A1-206ENST00000466591 CRYBB1P53674 252 aaPredicted RBP19.77■□□□□ 0.76
COL7A1-206ENST00000466591 EVCP57679 992 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 PRKCEQ02156 737 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 GALNT17Q6IS24 598 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 FAM43BQ6ZT52 329 aaPredicted RBP19.77■□□□□ 0.76
COL7A1-206ENST00000466591 MIER3Q7Z3K6 550 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 LINC01599Q8WXQ3 324 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 RIT2Q99578 217 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 ADAM2Q99965 735 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 SLKQ9H2G2 1235 aaPredicted RBP19.77■□□□□ 0.76
COL7A1-206ENST00000466591 IGFLR1Q9H665 355 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 ALG13Q9NP73 1137 aaKnown RBP19.77■□□□□ 0.76
COL7A1-206ENST00000466591 SEPT9Q9UHD8 586 aaPredicted RBP19.77■□□□□ 0.76
COL7A1-206ENST00000466591 ST3GAL5Q9UNP4 418 aa19.77■□□□□ 0.76
COL7A1-206ENST00000466591 MRPL42Q9Y6G3 142 aaKnown RBP19.77■□□□□ 0.76
COL7A1-206ENST00000466591 CCDC194A0A1B0GVG4 234 aa19.76■□□□□ 0.75
COL7A1-206ENST00000466591 C5orf67F2Z3F1 127 aa19.76■□□□□ 0.75
COL7A1-206ENST00000466591 GRM6O15303 877 aa19.76■□□□□ 0.75
COL7A1-206ENST00000466591 MSH4O15457 936 aa19.76■□□□□ 0.75
COL7A1-206ENST00000466591 ZSCAN20P17040 1043 aaPredicted RBP19.76■□□□□ 0.75
COL7A1-206ENST00000466591 CLCN3P51790 818 aa19.76■□□□□ 0.75
COL7A1-206ENST00000466591 TBC1D8BQ0IIM8 1120 aa19.76■□□□□ 0.75
COL7A1-206ENST00000466591 NONOQ15233 471 aaKnown RBP eCLIP19.76■□□□□ 0.75
COL7A1-206ENST00000466591 EFCAB12Q6NXP0 572 aa19.76■□□□□ 0.75
COL7A1-206ENST00000466591 CLP1Q92989 425 aaKnown RBP19.76■□□□□ 0.75
COL7A1-206ENST00000466591 ZNF689Q96CS4 500 aaPredicted RBP19.76■□□□□ 0.75
COL7A1-206ENST00000466591 PABPC5Q96DU9 382 aaKnown RBP19.76■□□□□ 0.75
COL7A1-206ENST00000466591 ATP6V0A4Q9HBG4 840 aa19.76■□□□□ 0.75
COL7A1-206ENST00000466591 PCDHB12Q9Y5F1 795 aa19.76■□□□□ 0.75
COL7A1-206ENST00000466591 TTC28Q96AY4 2481 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.75■□□□□ 0.75
COL7A1-206ENST00000466591 TBKBP1A7MCY6 615 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 ATP4AP20648 1035 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 COL9A1P20849 921 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 SLC24A5Q71RS6 500 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 KRT25Q7Z3Z0 450 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 RTN4RL1Q86UN2 441 aaPredicted RBP19.75■□□□□ 0.75
COL7A1-206ENST00000466591 ABI1Q8IZP0 508 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 LRRC71Q8N4P6 559 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 MICAL1Q8TDZ2 1067 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 NLRP7Q8WX94 980 aa19.75■□□□□ 0.75
COL7A1-206ENST00000466591 ERVK-5Q9HDB9 667 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms