RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 DZANK1Q9NVP4 752 aa17■□□□□ 0.31
HMGXB4-206ENST00000466438 ERAP1Q9NZ08 941 aa17■□□□□ 0.31
HMGXB4-206ENST00000466438 GPR179Q6PRD1 2367 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 CLASP2O75122 1294 aaKnown RBP16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 FGAP02671 866 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 ADRB1P08588 477 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 PDE4AP27815 886 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 PPM1AP35813 382 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 TCF7P36402 384 aaPredicted RBP16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 MRPS9P82933 396 aaKnown RBP16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 KRT17Q04695 432 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 TBC1D8BQ0IIM8 1120 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 SMC1AQ14683 1233 aaKnown RBP16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 FCHSD1Q86WN1 690 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 MRPL43Q8N983 215 aaKnown RBP16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 SENP7Q9BQF6 1050 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 C1orf112Q9NSG2 853 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 WNT16Q9UBV4 365 aa16.99■□□□□ 0.31
HMGXB4-206ENST00000466438 FRMPD4Q14CM0 1322 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 KDM3AQ9Y4C1 1321 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 LOXHD1Q8IVV2 1947 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 C2orf71A6NGG8 1288 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 GCOM1H8Y6P7 765 aaPredicted RBP16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 PPP1R11O60927 126 aaPredicted RBP16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 POLR2MP0CAP2 368 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 RFX1P22670 979 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 MARK3P27448 753 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 TMEM62Q0P6H9 643 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 MFSD6Q6ZSS7 791 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 OTOP3Q7RTS5 596 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 C12orf76Q8N812 135 aaPredicted RBP16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 ZKSCAN3Q9BRR0 538 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 CELF4Q9BZC1 486 aaKnown RBP16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 KAT14Q9H8E8 782 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 KCNK12Q9HB15 430 aa16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 CDV3Q9UKY7 258 aaKnown RBP16.98■□□□□ 0.31
HMGXB4-206ENST00000466438 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 RRN3P2A6NIE6 340 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 PRR5-ARHGAP8B1AHC4 643 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 MGEA5O60502 916 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 PARP1P09874 1014 aaKnown RBP16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 IGBP1P78318 339 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 ARHGAP8P85298 464 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 NFX1Q12986 1120 aaKnown RBP16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 TMEM266Q2M3C6 531 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 KCNT2Q6UVM3 1135 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 SLC24A5Q71RS6 500 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 ESR2Q92731 530 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 ZBTB10Q96DT7 871 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 CHAMP1Q96JM3 812 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 ZNF558Q96NG5 402 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 RGS18Q9NS28 235 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 NCDNQ9UBB6 729 aa16.97■□□□□ 0.31
HMGXB4-206ENST00000466438 ZMYM6O95789 1325 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 DENND3A2RUS2 1198 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 KRBA1A5PL33 1030 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 TRIM6-TRIM34B2RNG4 842 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 C9IYK1 514 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 HAND2P61296 217 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 LMNB2Q03252 620 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 VARS2Q5ST30 1063 aaKnown RBP16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 KANK3Q6NY19 840 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 CCDC149Q6ZUS6 474 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 C1orf210Q8IVY1 113 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 GIMAP8Q8ND71 665 aaPredicted RBP16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 PI4K2BQ8TCG2 481 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 MTMR8Q96EF0 704 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 ADAM2Q99965 735 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 RTKNQ9BST9 563 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 TBC1D17Q9HA65 648 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 RTEL1Q9NZ71 1219 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 IGSF9Q9P2J2 1179 aa16.96■□□□□ 0.31
HMGXB4-206ENST00000466438 FAM208BQ5VWN6 2430 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 ZBTB5O15062 677 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 NARSO43776 548 aaKnown RBP16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 CFHP08603 1231 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 FGFR1P11362 822 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 CCDC178Q5BJE1 867 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 GLG1Q92896 1179 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 BORCS6Q96GS4 357 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 RNF41Q9H4P4 317 aaPredicted RBP16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 ATP6V0A4Q9HBG4 840 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 TMEM161AQ9NX61 479 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 SPG21Q9NZD8 308 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 DLGAP2Q9P1A6 1054 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 RALYQ9UKM9 306 aaKnown RBP16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 PKD1L2Q7Z442 2459 aa16.95■□□□□ 0.3
HMGXB4-206ENST00000466438 DCDC2BA2VCK2 349 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 INSRRP14616 1297 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 KRT76Q01546 638 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 LRRC55Q6ZSA7 311 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 CENPQQ7L2Z9 268 aaPredicted RBP16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 TBC1D10CQ8IV04 446 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 SEPT1Q8WYJ6 367 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 TMEM117Q9H0C3 514 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 SMARCAD1Q9H4L7 1026 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 ELAC1Q9H777 363 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms