RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ALG1Q9BT22 464 aa6.21□□□□□ -1.42
LRCH3-211ENST00000466054 INTS7Q9NVH2 962 aaKnown RBP6.21□□□□□ -1.42
LRCH3-211ENST00000466054 TRAF6Q9Y4K3 522 aa6.21□□□□□ -1.42
LRCH3-211ENST00000466054 CD2APQ9Y5K6 639 aa6.21□□□□□ -1.42
LRCH3-211ENST00000466054 ASXL2Q76L83 1435 aa6.21□□□□□ -1.42
LRCH3-211ENST00000466054 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.2□□□□□ -1.42
LRCH3-211ENST00000466054 MSCO60682 206 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 RAPGEF3O95398 923 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 CKMP06732 381 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 HHEXQ03014 270 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 GRIN1Q05586 938 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 BRAPQ7Z569 592 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 MTDHQ86UE4 582 aaKnown RBP6.2□□□□□ -1.42
LRCH3-211ENST00000466054 MAGEB10Q96LZ2 347 aaPredicted RBP6.2□□□□□ -1.42
LRCH3-211ENST00000466054 AGAP2Q99490 1192 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 PRRX2Q99811 253 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 DPYSL5Q9BPU6 564 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 TRIM39Q9HCM9 518 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 FBXL7Q9UJT9 491 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 PTPN22Q9Y2R2 807 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 SLC30A1Q9Y6M5 507 aa6.2□□□□□ -1.42
LRCH3-211ENST00000466054 ARVCFO00192 962 aa6.19□□□□□ -1.42
LRCH3-211ENST00000466054 ZNF888P0CJ79 500 aaPredicted RBP6.19□□□□□ -1.42
LRCH3-211ENST00000466054 HIBADHP31937 336 aaKnown RBP6.19□□□□□ -1.42
LRCH3-211ENST00000466054 GUCY1A3Q02108 690 aa6.19□□□□□ -1.42
LRCH3-211ENST00000466054 Q6ZSN1 163 aa6.19□□□□□ -1.42
LRCH3-211ENST00000466054 CLIP3Q96DZ5 547 aa6.19□□□□□ -1.42
LRCH3-211ENST00000466054 CLUHP3Q96NS8 147 aa6.19□□□□□ -1.42
LRCH3-211ENST00000466054 KATNBL1Q9H079 304 aa6.19□□□□□ -1.42
LRCH3-211ENST00000466054 AURKAIP1Q9NWT8 199 aaPredicted RBP6.19□□□□□ -1.42
LRCH3-211ENST00000466054 HSPBP1Q9NZL4 362 aa6.19□□□□□ -1.42
LRCH3-211ENST00000466054 MAGEC2Q9UBF1 373 aaPredicted RBP6.19□□□□□ -1.42
LRCH3-211ENST00000466054 ASH2LQ9UBL3 628 aa6.19□□□□□ -1.42
LRCH3-211ENST00000466054 NR2E1Q9Y466 385 aa6.19□□□□□ -1.42
LRCH3-211ENST00000466054 B4E1Z4 1266 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 FAM47E-STBD1D6RA91 191 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 WNT9AO14904 365 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 CRTAMO95727 393 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 BMP5P22003 454 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 GRK2P25098 689 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 GRK3P35626 688 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 PAK1Q13153 545 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 DALRD3Q5D0E6 543 aaKnown RBP6.18□□□□□ -1.42
LRCH3-211ENST00000466054 ZMAT1Q5H9K5 638 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 CYP4F22Q6NT55 531 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 NIM1KQ8IY84 436 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 TTLL11Q8NHH1 800 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 SCLYQ96I15 445 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 PRKAB1Q9Y478 270 aa6.18□□□□□ -1.42
LRCH3-211ENST00000466054 NPTXRO95502 500 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 SOD2P04179 222 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 ASLP04424 464 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 RPS19P39019 145 aaKnown RBP6.17□□□□□ -1.42
LRCH3-211ENST00000466054 GYS2P54840 703 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 RRADP55042 308 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 MAMDC4Q6UXC1 1216 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 PROSER1Q86XN7 944 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 ZNF808Q8N4W9 903 aaPredicted RBP6.17□□□□□ -1.42
LRCH3-211ENST00000466054 MFSD3Q96ES6 412 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 TTPALQ9BTX7 342 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 PLA2G12BQ9BX93 195 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 CDIP1Q9H305 208 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 NUB1Q9Y5A7 615 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 PCDHA9Q9Y5H5 950 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 PCDHA8Q9Y5H6 950 aa6.17□□□□□ -1.42
LRCH3-211ENST00000466054 TCRBV16S1A1N1A0A5B0 115 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 SLC27A2O14975 620 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 GSTA4O15217 222 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 ENO2P09104 434 aaPredicted RBP6.16□□□□□ -1.42
LRCH3-211ENST00000466054 IGFALSP35858 605 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 RNF151Q2KHN1 245 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 TM4SF20Q53R12 229 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 FNDC7Q5VTL7 733 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 FGD2Q7Z6J4 655 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 FAM177A1Q8N128 213 aaPredicted RBP6.16□□□□□ -1.42
LRCH3-211ENST00000466054 TLR9Q9NR96 1032 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 KCND1Q9NSA2 647 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 PARPBPQ9NWS1 579 aa6.16□□□□□ -1.42
LRCH3-211ENST00000466054 CUTAO60888 179 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 DNAJC8O75937 253 aaPredicted RBP6.15□□□□□ -1.42
LRCH3-211ENST00000466054 RASGRP1O95267 797 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 SDSP20132 328 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 FLT3P36888 993 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 FSTL1Q12841 308 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 FAM47CQ5HY64 1035 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 SGMS1Q86VZ5 419 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 ZC3H7AQ8IWR0 971 aaKnown RBP6.15□□□□□ -1.42
LRCH3-211ENST00000466054 PCDH19Q8TAB3 1148 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 FBXW5Q969U6 566 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 IPPKQ9H8X2 491 aa6.15□□□□□ -1.42
LRCH3-211ENST00000466054 PPARGC1AQ9UBK2 798 aaKnown RBP6.15□□□□□ -1.42
LRCH3-211ENST00000466054 SBNO2Q9Y2G9 1366 aa6.15□□□□□ -1.43
LRCH3-211ENST00000466054 TMEM191CA6NGB0 347 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 OPA1O60313 960 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 POU3F2P20265 443 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-211ENST00000466054 POLD1P28340 1107 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 MSX2P35548 267 aaPredicted RBP6.14□□□□□ -1.43
LRCH3-211ENST00000466054 IL12RB1P42701 662 aa6.14□□□□□ -1.43
LRCH3-211ENST00000466054 MRPS21P82921 87 aaKnown RBP6.14□□□□□ -1.43
LRCH3-211ENST00000466054 PFKPQ01813 784 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms