RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 GOLGA6L10A0A0M3HER8 536 aa21.45■■□□□ 1.02
SDF4-205ENST00000465727 AGTP01019 485 aa21.45■■□□□ 1.02
SDF4-205ENST00000465727 IBSPP21815 317 aaPredicted RBP21.45■■□□□ 1.02
SDF4-205ENST00000465727 DENND2CQ68D51 928 aa21.45■■□□□ 1.02
SDF4-205ENST00000465727 DUPD1Q68J44 220 aa21.45■■□□□ 1.02
SDF4-205ENST00000465727 CELF4Q9BZC1 486 aaKnown RBP21.45■■□□□ 1.02
SDF4-205ENST00000465727 EMILIN3Q9NT22 766 aa21.45■■□□□ 1.02
SDF4-205ENST00000465727 ZDHHC18Q9NUE0 388 aa21.45■■□□□ 1.02
SDF4-205ENST00000465727 TMEM260Q9NX78 707 aa21.45■■□□□ 1.02
SDF4-205ENST00000465727 CNOT7Q9UIV1 285 aaKnown RBP21.45■■□□□ 1.02
SDF4-205ENST00000465727 HDAC9Q9UKV0 1011 aa21.45■■□□□ 1.02
SDF4-205ENST00000465727 KIF3CO14782 793 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 TDP2O95551 362 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 AFPP02771 609 aaKnown RBP21.44■■□□□ 1.02
SDF4-205ENST00000465727 RASA1P20936 1047 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 GBP1P32455 592 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 ADCY7P51828 1080 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 PMS2P54278 862 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 DHX34Q14147 1143 aaKnown RBP21.44■■□□□ 1.02
SDF4-205ENST00000465727 NAA25Q14CX7 972 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 EXOC3L4Q17RC7 722 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 SLC4A8Q2Y0W8 1093 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 COL23A1Q86Y22 540 aaPredicted RBP21.44■■□□□ 1.02
SDF4-205ENST00000465727 NELFCDQ8IXH7 590 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 SCFD1Q8WVM8 642 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 ERP44Q9BS26 406 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 ZNF652Q9Y2D9 606 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 C15orf41Q9Y2V0 281 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 TAF1P21675 1872 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 FGGP02679 453 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 ALADP13716 330 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 PAX7P23759 505 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 DR1Q01658 176 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 PPARDQ03181 441 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 ADCY2Q08462 1091 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 ZKSCAN8Q15776 578 aaPredicted RBP21.44■■□□□ 1.02
SDF4-205ENST00000465727 C6orf118Q5T5N4 469 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 TBC1D31Q96DN5 1066 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 FAM212AQ96EL1 285 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 PIGSQ96S52 555 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 TMEM109Q9BVC6 243 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 CARD9Q9H257 536 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 ADAM7Q9H2U9 754 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 EPB41L4BQ9H329 900 aa21.44■■□□□ 1.02
SDF4-205ENST00000465727 INTS9Q9NV88 658 aaKnown RBP21.44■■□□□ 1.02
SDF4-205ENST00000465727 NEBLO76041 1014 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 CRKLP46109 303 aaKnown RBP21.43■■□□□ 1.02
SDF4-205ENST00000465727 IRX1P78414 480 aaPredicted RBP21.43■■□□□ 1.02
SDF4-205ENST00000465727 GBP7Q8N8V2 638 aaPredicted RBP21.43■■□□□ 1.02
SDF4-205ENST00000465727 PROCA1Q8NCQ7 364 aaPredicted RBP21.43■■□□□ 1.02
SDF4-205ENST00000465727 NSMCE1Q8WV22 266 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 SELENOSQ9BQE4 189 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 CPVLQ9H3G5 476 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 RIOX1Q9H6W3 641 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 ARMCX3Q9UH62 379 aaPredicted RBP21.43■■□□□ 1.02
SDF4-205ENST00000465727 DAAM1Q9Y4D1 1078 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 RGS16O15492 202 aaPredicted RBP21.43■■□□□ 1.02
SDF4-205ENST00000465727 RPSAP08865 295 aaKnown RBP21.43■■□□□ 1.02
SDF4-205ENST00000465727 PON1P27169 355 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 ZNF131P52739 623 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 LRCH2Q5VUJ6 765 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 BTNL9Q6UXG8 535 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 TCP11Q8WWU5 503 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 MOV10L1Q9BXT6 1211 aaKnown RBP21.43■■□□□ 1.02
SDF4-205ENST00000465727 KANSL2Q9H9L4 492 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.43■■□□□ 1.022e-6■■■■□ 23.1
SDF4-205ENST00000465727 RASAL2Q9UJF2 1139 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 TRPC6Q9Y210 931 aa21.43■■□□□ 1.02
SDF4-205ENST00000465727 NCANO14594 1321 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 PITPNM2Q9BZ72 1349 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 PPP1R12BO60237 982 aaPredicted RBP21.42■■□□□ 1.02
SDF4-205ENST00000465727 CLTAP09496 248 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 ACTN1P12814 892 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 SLC9A1P19634 815 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 NR2F2P24468 414 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 ECM1Q16610 540 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 ACCSLQ4AC99 568 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 HERC4Q5GLZ8 1057 aaPredicted RBP21.42■■□□□ 1.02
SDF4-205ENST00000465727 LRRC34Q8IZ02 419 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 TRIM51Q9BSJ1 452 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 NOP53Q9NZM5 478 aaKnown RBP21.42■■□□□ 1.02
SDF4-205ENST00000465727 TRAF3IP3Q9Y228 551 aa21.42■■□□□ 1.02
SDF4-205ENST00000465727 FRMD3A2A2Y4 597 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 EDIL3O43854 480 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 FERP16591 822 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 PDE6CP51160 858 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 JAM2P57087 298 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 KLRC3Q07444 240 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 USP17L2Q6R6M4 530 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 PNMA8AQ86V59 439 aaPredicted RBP21.41■■□□□ 1.02
SDF4-205ENST00000465727 RBM46Q8TBY0 533 aaKnown RBP21.41■■□□□ 1.02
SDF4-205ENST00000465727 STAMBPL1Q96FJ0 436 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 MXD3Q9BW11 206 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 FGFBP2Q9BYJ0 223 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 ANKRD2Q9GZV1 360 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 LRRC4CQ9HCJ2 640 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 KCNMB3Q9NPA1 279 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 BAG3O95817 575 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 SHBGP04278 402 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 XRCC5P13010 732 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms