RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TBC1D22BQ9NU19 505 aa25.87■■□□□ 1.73
USP42-205ENST00000465073 RNF216Q9NWF9 866 aaPredicted RBP25.87■■□□□ 1.73
USP42-205ENST00000465073 ZP2Q05996 745 aa25.86■■□□□ 1.73
USP42-205ENST00000465073 APOBRQ0VD83 1088 aa25.86■■□□□ 1.73
USP42-205ENST00000465073 CAMK1Q14012 370 aa25.86■■□□□ 1.73
USP42-205ENST00000465073 PPP2R3CQ969Q6 453 aa25.86■■□□□ 1.73
USP42-205ENST00000465073 ERVK-5Q9HDB9 667 aa25.86■■□□□ 1.73
USP42-205ENST00000465073 GINS2Q9Y248 185 aa25.86■■□□□ 1.73
USP42-205ENST00000465073 ITGB1P05556 798 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 SARSP49591 514 aaKnown RBP25.85■■□□□ 1.73
USP42-205ENST00000465073 SETQ01105 290 aaPredicted RBP25.85■■□□□ 1.73
USP42-205ENST00000465073 PAN2Q504Q3 1202 aaKnown RBP25.85■■□□□ 1.73
USP42-205ENST00000465073 ZNF746Q6NUN9 644 aaPredicted RBP25.85■■□□□ 1.73
USP42-205ENST00000465073 Q6ZUG5 572 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 ADHFE1Q8IWW8 467 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 REXO1Q8N1G1 1221 aaKnown RBP25.85■■□□□ 1.73
USP42-205ENST00000465073 SPPL3Q8TCT6 385 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 NOC2LQ9Y3T9 749 aaKnown RBP25.85■■□□□ 1.73
USP42-205ENST00000465073 PCDHB7Q9Y5E2 793 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 ZBTB42B2RXF5 422 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 PRPF3O43395 683 aaKnown RBP25.85■■□□□ 1.73
USP42-205ENST00000465073 RPS6KA5O75582 802 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 CPA1P15085 419 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 GNA11P29992 359 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 CKAP2LQ8IYA6 745 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 KLHL23Q8NBE8 558 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 BBXQ8WY36 941 aaPredicted RBP25.85■■□□□ 1.73
USP42-205ENST00000465073 BRF1Q92994 677 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 IGFLR1Q9H665 355 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 CDHR5Q9HBB8 845 aa25.85■■□□□ 1.73
USP42-205ENST00000465073 MAFBQ9Y5Q3 323 aaPredicted RBP25.85■■□□□ 1.73
USP42-205ENST00000465073 C19orf67A6NJJ6 358 aa25.84■■□□□ 1.73
USP42-205ENST00000465073 PRR33A8MZF0 331 aa25.84■■□□□ 1.73
USP42-205ENST00000465073 GPR182O15218 404 aa25.84■■□□□ 1.73
USP42-205ENST00000465073 ATP4AP20648 1035 aa25.84■■□□□ 1.73
USP42-205ENST00000465073 DLX2Q07687 328 aaPredicted RBP25.84■■□□□ 1.73
USP42-205ENST00000465073 PKN1Q16512 942 aa25.84■■□□□ 1.73
USP42-205ENST00000465073 SMAP1Q8IYB5 467 aaPredicted RBP25.84■■□□□ 1.73
USP42-205ENST00000465073 JAKMIP1Q96N16 626 aaKnown RBP25.84■■□□□ 1.73
USP42-205ENST00000465073 C1orf112Q9NSG2 853 aa25.84■■□□□ 1.73
USP42-205ENST00000465073 TCEAL9Q9UHQ7 104 aa25.84■■□□□ 1.73
USP42-205ENST00000465073 DENND3A2RUS2 1198 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 DNAJB1P25685 340 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 GTF2F1P35269 517 aaKnown RBP eCLIP25.83■■□□□ 1.73
USP42-205ENST00000465073 CRYBB1P53674 252 aaPredicted RBP25.83■■□□□ 1.73
USP42-205ENST00000465073 ADAM15Q13444 863 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 SMAD2Q15796 467 aaKnown RBP25.83■■□□□ 1.73
USP42-205ENST00000465073 BLOC1S2Q6QNY1 142 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 FBXL16Q8N461 479 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 TMEM40Q8WWA1 233 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 UIMC1Q96RL1 719 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 ADAM2Q99965 735 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 RGS18Q9NS28 235 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 ST3GAL5Q9UNP4 418 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 PCDHA10Q9Y5I2 948 aa25.83■■□□□ 1.73
USP42-205ENST00000465073 NID2Q14112 1375 aa25.83■■□□□ 1.72
USP42-205ENST00000465073 ADAMTS3O15072 1205 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 DCXO43602 365 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 MGEA5O60502 916 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 CSPG5O95196 566 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 C22orf31O95567 290 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 PSAPP07602 524 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 HSPA4P34932 840 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 GATMP50440 423 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 AKAP17AQ02040 695 aaKnown RBP25.82■■□□□ 1.72
USP42-205ENST00000465073 CLUL1Q15846 466 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 SLC24A5Q71RS6 500 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 BICD2Q8TD16 824 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 UPF3BQ9BZI7 483 aaKnown RBP25.82■■□□□ 1.72
USP42-205ENST00000465073 SNX14Q9Y5W7 946 aa25.82■■□□□ 1.72
USP42-205ENST00000465073 MBTPS2O43462 519 aa25.81■■□□□ 1.72
USP42-205ENST00000465073 CIITAP33076 1130 aa25.81■■□□□ 1.72
USP42-205ENST00000465073 SMAD4Q13485 552 aaKnown RBP25.81■■□□□ 1.72
USP42-205ENST00000465073 PRR16Q569H4 304 aa25.81■■□□□ 1.72
USP42-205ENST00000465073 POF1BQ8WVV4 589 aa25.81■■□□□ 1.72
USP42-205ENST00000465073 POP1Q99575 1024 aaKnown RBP25.81■■□□□ 1.72
USP42-205ENST00000465073 CD207Q9UJ71 328 aa25.81■■□□□ 1.72
USP42-205ENST00000465073 CEP131Q9UPN4 1083 aa25.81■■□□□ 1.72
USP42-205ENST00000465073 C9IYK1 514 aa25.8■■□□□ 1.72
USP42-205ENST00000465073 LINC01565O15544 149 aa25.8■■□□□ 1.72
USP42-205ENST00000465073 TBX10O75333 385 aa25.8■■□□□ 1.72
USP42-205ENST00000465073 IBSPP21815 317 aaPredicted RBP25.8■■□□□ 1.72
USP42-205ENST00000465073 KIZQ2M2Z5 673 aa25.8■■□□□ 1.72
USP42-205ENST00000465073 AAASQ9NRG9 546 aa25.8■■□□□ 1.72
USP42-205ENST00000465073 PCDHB12Q9Y5F1 795 aa25.8■■□□□ 1.72
USP42-205ENST00000465073 METTL13Q8N6R0 699 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 EFHBQ8N7U6 833 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 PHKBQ93100 1093 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 AGXT2Q9BYV1 514 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 LOXHD1Q8IVV2 1947 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 ATG2AQ2TAZ0 1938 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 MAGEB2O15479 319 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 GPR32O75388 356 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 RPS6KB1P23443 525 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 IRS1P35568 1242 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 NDUFV1P49821 464 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 FAM189BP81408 668 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 CSPP1Q1MSJ5 1256 aa25.79■■□□□ 1.72
USP42-205ENST00000465073 SPOUT1Q5T280 376 aaKnown RBP25.79■■□□□ 1.72
USP42-205ENST00000465073 CCDC148Q8NFR7 591 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms