RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 IGSF9BQ9UPX0 1349 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 TULP1O00294 542 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CLIC2O15247 247 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 MGRN1O60291 552 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 AKAP3O75969 853 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 H2AFZP0C0S5 128 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 HOXD13P35453 343 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 GALCP54803 685 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 MTMR3Q13615 1198 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 SPTY2D1Q68D10 685 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 POTEEQ6S8J3 1075 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 H2AFVQ71UI9 128 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC26Q8TAB7 109 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 TLCD1Q96CP7 247 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CALR3Q96L12 384 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 ZNF317Q96PQ6 595 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 ADAM7Q9H2U9 754 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 RTCBQ9Y3I0 505 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 KCNQ2O43526 872 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 ATP6V1G2O95670 118 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 SLURP2P0DP57 97 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CLNS1AP54105 237 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC65Q8IXS2 484 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 MARCH10Q8NA82 808 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC197Q8NCU1 140 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 THOC1Q96FV9 657 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 PRMT1Q99873 361 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 AZI2Q9H6S1 392 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 ARMCX3Q9UH62 379 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CHORDC1Q9UHD1 332 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CES2O00748 559 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 RFC4P35249 363 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 ARHGAP27Q6ZUM4 889 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 GLYCTKQ8IVS8 523 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 RASGEF1CQ8N431 466 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 EIF1ADQ8N9N8 165 aaKnown RBP13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 NEDD1Q8NHV4 660 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 RIOX1Q9H6W3 641 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 TMOD4Q9NZQ9 345 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 AGAP1Q9UPQ3 857 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 MYH14Q7Z406 1995 aaKnown RBP13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 FOXO6A8MYZ6 492 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC188H7C350 402 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 HGSO14964 777 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 MED24O75448 989 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 GNA14O95837 355 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 SLC29A2Q14542 456 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 SLFN11Q7Z7L1 901 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 FBXO25Q8TCJ0 367 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC113Q9H0I3 377 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 KDM4CQ9H3R0 1056 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 ANKIB1Q9P2G1 1089 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 CD2APQ9Y5K6 639 aa13.69□□□□□ -0.22
CLCNKA-204ENST00000464764 BTNL10A8MVZ5 291 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L15C9J2P7 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L13C9JLJ4 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L11C9JVI0 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L18D6R9N7 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L22D6RA61 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L17D6RBQ6 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L19D6RCP7 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L20D6RJB6 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 FLOT1O75955 427 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 AFPP02771 609 aaKnown RBP13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 VIMP08670 466 aaKnown RBP13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L24Q0WX57 530 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 LLGL1Q15334 1064 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 C3orf20Q8ND61 904 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 SLC35G2Q8TBE7 412 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 HES6Q96HZ4 224 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 SEMA4AQ9H3S1 761 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 SIX2Q9NPC8 291 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 ABCF3Q9NUQ8 709 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 SUCLA2Q9P2R7 463 aaPredicted RBP13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 SRP68Q9UHB9 627 aaKnown RBP13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 BCS1LQ9Y276 419 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 ZNF652Q9Y2D9 606 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 RREB1Q92766 1687 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 SFI1A8K8P3 1242 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 RSPH10B2B2RC85 870 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 PPFIA2O75334 1257 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 BAG3O95817 575 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 RSPH10BP0C881 870 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 BTDP43251 543 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 MYO1EQ12965 1108 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 PABPC4Q13310 644 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 NAA25Q14CX7 972 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 TLDC1Q6P9B6 456 aa13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 ATXN2LQ8WWM7 1075 aaKnown RBP13.68□□□□□ -0.22
CLCNKA-204ENST00000464764 NLRP3Q96P20 1036 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms