RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 ALG13Q9NP73 1137 aaKnown RBP16.47■□□□□ 0.23
ALMS1-202ENST00000464408 NOC2LQ9Y3T9 749 aaKnown RBP16.47■□□□□ 0.23
ALMS1-202ENST00000464408 SQORQ9Y6N5 450 aa16.47■□□□□ 0.23
ALMS1-202ENST00000464408 C22orf31O95567 290 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 DNAJB1P25685 340 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 GTF2F1P35269 517 aaKnown RBP eCLIP16.46■□□□□ 0.23
ALMS1-202ENST00000464408 LTBRP36941 435 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 SLC26A2P50443 739 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 NFX1Q12986 1120 aaKnown RBP16.46■□□□□ 0.23
ALMS1-202ENST00000464408 CAMK1Q14012 370 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 COL19A1Q14993 1142 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 NPAS4Q8IUM7 802 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 FAM178BQ8IXR5 827 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
ALMS1-202ENST00000464408 TNPO1Q92973 898 aaKnown RBP16.46■□□□□ 0.23
ALMS1-202ENST00000464408 GJA10Q969M2 543 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 PABPC5Q96DU9 382 aaKnown RBP16.46■□□□□ 0.23
ALMS1-202ENST00000464408 C11orf84Q9BUA3 381 aaPredicted RBP16.46■□□□□ 0.23
ALMS1-202ENST00000464408 FTHL17Q9BXU8 183 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 ERVK-5Q9HDB9 667 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 MAFBQ9Y5Q3 323 aaPredicted RBP16.46■□□□□ 0.23
ALMS1-202ENST00000464408 COL1A2P08123 1366 aa16.46■□□□□ 0.23
ALMS1-202ENST00000464408 GRXCR2A6NFK2 248 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 VTNP04004 478 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 RPLP2P05387 115 aaKnown RBP16.45■□□□□ 0.22
ALMS1-202ENST00000464408 RB1P06400 928 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 IFNAR1P17181 557 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
ALMS1-202ENST00000464408 DLX2Q07687 328 aaPredicted RBP16.45■□□□□ 0.22
ALMS1-202ENST00000464408 HYAL1Q12794 435 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 KIZQ2M2Z5 673 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 ZNF484Q5JVG2 852 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 ZNF746Q6NUN9 644 aaPredicted RBP16.45■□□□□ 0.22
ALMS1-202ENST00000464408 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 NME8Q8N427 588 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 RNF26Q9BY78 433 aaPredicted RBP16.45■□□□□ 0.22
ALMS1-202ENST00000464408 C11orf16Q9NQ32 467 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 CLDND1Q9NY35 253 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 HCSTQ9UBK5 93 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 GABBR1Q9UBS5 961 aa16.45■□□□□ 0.22
ALMS1-202ENST00000464408 FAM86C2PA6NEL3 165 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 MSH4O15457 936 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 LINC01565O15544 149 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 RPS6KA5O75582 802 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 ITGB1P05556 798 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 PSMA5P28066 241 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 GNA11P29992 359 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 CIITAP33076 1130 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 EVCP57679 992 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 AKAP17AQ02040 695 aaKnown RBP16.44■□□□□ 0.22
ALMS1-202ENST00000464408 CLUL1Q15846 466 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 FAM228AQ86W67 206 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 CMTR2Q8IYT2 770 aaKnown RBP16.44■□□□□ 0.22
ALMS1-202ENST00000464408 OSMRQ99650 979 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 LRFN3Q9BTN0 628 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 C1QTNF1Q9BXJ1 281 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 TBC1D22BQ9NU19 505 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 ST3GAL5Q9UNP4 418 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 PLAGL2Q9UPG8 496 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 RWDD3Q9Y3V2 267 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 PCDHGC5Q9Y5F6 944 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 PCDHA10Q9Y5I2 948 aa16.44■□□□□ 0.22
ALMS1-202ENST00000464408 ZNF862O60290 1169 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 DTNBO60941 627 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 GPR32O75388 356 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 REC8O95072 547 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 MMP1P03956 469 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 PSAPP07602 524 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 IRS1P35568 1242 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 CLCN3P51790 818 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 UGCGQ16739 394 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 RUFY3Q7L099 469 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 SMAP1Q8IYB5 467 aaPredicted RBP16.43■□□□□ 0.22
ALMS1-202ENST00000464408 GJD3Q8N144 294 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 METTL13Q8N6R0 699 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 KLHL23Q8NBE8 558 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 BBXQ8WY36 941 aaPredicted RBP16.43■□□□□ 0.22
ALMS1-202ENST00000464408 ZNF668Q96K58 619 aaPredicted RBP16.43■□□□□ 0.22
ALMS1-202ENST00000464408 AIFM3Q96NN9 605 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 ADAM2Q99965 735 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 LMAN2LQ9H0V9 348 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 IGFLR1Q9H665 355 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
ALMS1-202ENST00000464408 CHMP2AO43633 222 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 TBX10O75333 385 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 STAG3L1P0CL83 205 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 SARSP49591 514 aaKnown RBP16.42■□□□□ 0.22
ALMS1-202ENST00000464408 CTC1Q2NKJ3 1217 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 FAM102BQ5T8I3 360 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 ADGRD2Q7Z7M1 963 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 LRRC71Q8N4P6 559 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 CCDC148Q8NFR7 591 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 BICD2Q8TD16 824 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 PLVAPQ9BX97 442 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
ALMS1-202ENST00000464408 UNC45AQ9H3U1 944 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 LRFN2Q9ULH4 789 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 SAMM50Q9Y512 469 aa16.42■□□□□ 0.22
ALMS1-202ENST00000464408 TDP2O95551 362 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms