RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 TRAF5O00463 557 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 DNAJA2O60884 412 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 FSHBP01225 129 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 SYPP08247 313 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 CCT4P50991 539 aaKnown RBP6.73□□□□□ -1.33
CD46-211ENST00000464082 ADAM17P78536 824 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 RABL6Q3YEC7 729 aaPredicted RBP6.73□□□□□ -1.33
CD46-211ENST00000464082 VWA3BQ502W6 1294 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 CST9Q5W186 159 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 LMBR1LQ6UX01 489 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 DLK2Q6UY11 383 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 ANKRD44Q8N8A2 993 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 DPF2Q92785 391 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 KIF2CQ99661 725 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 SPATA25Q9BR10 227 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 TMX4Q9H1E5 349 aaPredicted RBP6.73□□□□□ -1.33
CD46-211ENST00000464082 CNOT7Q9UIV1 285 aaKnown RBP6.73□□□□□ -1.33
CD46-211ENST00000464082 GPR55Q9Y2T6 319 aaPredicted RBP6.73□□□□□ -1.33
CD46-211ENST00000464082 DUSP10Q9Y6W6 482 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 ASTN2O75129 1339 aaPredicted RBP6.73□□□□□ -1.33
CD46-211ENST00000464082 PTPRCP08575 1304 aa6.73□□□□□ -1.33
CD46-211ENST00000464082 MYH2Q9UKX2 1941 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 PRKCAP17252 672 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 ARL4AP40617 200 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 CHRNDQ07001 517 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 TNIP1Q15025 636 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 ALDH1L2Q3SY69 923 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 GALNT18Q6P9A2 607 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 SLC4A10Q6U841 1118 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 RPTNQ6XPR3 784 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 BNC2Q6ZN30 1099 aaPredicted RBP6.72□□□□□ -1.33
CD46-211ENST00000464082 ZNF655Q8N720 491 aaPredicted RBP6.72□□□□□ -1.33
CD46-211ENST00000464082 EYA3Q99504 573 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 MXD3Q9BW11 206 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 PUS3Q9BZE2 481 aaKnown RBP6.72□□□□□ -1.33
CD46-211ENST00000464082 USP44Q9H0E7 712 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 USP40Q9NVE5 1235 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 REV1Q9UBZ9 1251 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 TAF6LQ9Y6J9 622 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 CDK5RAP2Q96SN8 1893 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 ZNF804BA4D1E1 1349 aa6.72□□□□□ -1.33
CD46-211ENST00000464082 ANKRD18BA2A2Z9 1011 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 RASSF10A6NK89 507 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 TAF5LO75529 589 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 EIF4BP23588 611 aaKnown RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 RPS12P25398 132 aaKnown RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 IGHMBP2P38935 993 aaKnown RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 RFX5P48382 616 aaPredicted RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 RARSP54136 660 aaKnown RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 ZNF280AP59817 542 aaPredicted RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 ZNF200P98182 395 aaPredicted RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 CYP4F8P98187 520 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 CAP1Q01518 475 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 SNW1Q13573 536 aaKnown RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 CBX2Q14781 532 aaPredicted RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 DACT2Q5SW24 774 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 DIEXFQ68CQ4 756 aaKnown RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 C15orf52Q6ZUT6 534 aaKnown RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 PHACTR4Q8IZ21 702 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 GLIS2Q9BZE0 524 aaPredicted RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 BICC1Q9H694 974 aaKnown RBP6.71□□□□□ -1.34
CD46-211ENST00000464082 TNFRSF12AQ9NP84 129 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 TNFRSF10DQ9UBN6 386 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 TNNQ9UQP3 1299 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 RIPOR2Q9Y4F9 1068 aa6.71□□□□□ -1.34
CD46-211ENST00000464082 PLA2G1BP04054 148 aaKnown RBP6.7□□□□□ -1.34
CD46-211ENST00000464082 CT47B1P0C2W7 299 aaPredicted RBP6.7□□□□□ -1.34
CD46-211ENST00000464082 TMEM62Q0P6H9 643 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 IFIT5Q13325 482 aaKnown RBP6.7□□□□□ -1.34
CD46-211ENST00000464082 LAPTM5Q13571 262 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 PLEKHN1Q494U1 663 aaPredicted RBP6.7□□□□□ -1.34
CD46-211ENST00000464082 TBC1D10BQ4KMP7 808 aaPredicted RBP6.7□□□□□ -1.34
CD46-211ENST00000464082 LIPIQ6XZB0 460 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 CERS5Q8N5B7 392 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 VGLL2Q8N8G2 317 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 AGBL3Q8NEM8 1001 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 DDX1Q92499 740 aaKnown RBP6.7□□□□□ -1.34
CD46-211ENST00000464082 FCRL2Q96LA5 508 aaPredicted RBP6.7□□□□□ -1.34
CD46-211ENST00000464082 SMPD4Q9NXE4 827 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 C9orf78Q9NZ63 289 aaPredicted RBP6.7□□□□□ -1.34
CD46-211ENST00000464082 SUSD2Q9UGT4 822 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 NOB1Q9ULX3 412 aaKnown RBP6.7□□□□□ -1.34
CD46-211ENST00000464082 PLA2G2DQ9UNK4 145 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 AK9Q5TCS8 1911 aa6.7□□□□□ -1.34
CD46-211ENST00000464082 COL1A1P02452 1464 aaPredicted RBP6.69□□□□□ -1.34
CD46-211ENST00000464082 FAM221AA4D161 298 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 ADM5C9JUS6 153 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 P4HBP07237 508 aaKnown RBP6.69□□□□□ -1.34
CD46-211ENST00000464082 HSPA1AP0DMV8 641 aaKnown RBP6.69□□□□□ -1.34
CD46-211ENST00000464082 HSPA1BP0DMV9 641 aaKnown RBP6.69□□□□□ -1.34
CD46-211ENST00000464082 IL1R1P14778 569 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 LRRC24Q50LG9 513 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 MEI1Q5TIA1 1274 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 SLCO6A1Q86UG4 719 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 KLHDC4Q8TBB5 520 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 FNIP1Q8TF40 1166 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 ZBED3Q96IU2 234 aaPredicted RBP6.69□□□□□ -1.34
CD46-211ENST00000464082 SORCS2Q96PQ0 1159 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 MPHOSPH8Q99549 860 aa6.69□□□□□ -1.34
CD46-211ENST00000464082 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms