RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PPP2R2DQ66LE6 453 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 MICAL3Q7RTP6 2002 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 MIER3Q7Z3K6 550 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 CDHR5Q9HBB8 845 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 BRMS1Q9HCU9 246 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 SPTBN5Q9NRC6 3674 aaKnown RBP14.62□□□□□ -0.07
XRN1-203ENST00000463916 COL1A2P08123 1366 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 TLL1O43897 1013 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 STBD1O95210 358 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 OATP04181 439 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 GCFC2P16383 781 aaKnown RBP14.62□□□□□ -0.07
XRN1-203ENST00000463916 IER5Q5VY09 327 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 FAM20AQ96MK3 541 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 CERS4Q9HA82 394 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 EVPLQ92817 2033 aa14.62□□□□□ -0.07
XRN1-203ENST00000463916 EFCAB14O75071 495 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 TAP1Q03518 808 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 PPP2R5CQ13362 524 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 ADGRE1Q14246 886 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 MYOCDQ8IZQ8 938 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 BANK1Q8NDB2 785 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 C8orf76Q96K31 380 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 SH2D3AQ9BRG2 576 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 CELF4Q9BZC1 486 aaKnown RBP14.61□□□□□ -0.07
XRN1-203ENST00000463916 UPF2Q9HAU5 1272 aaKnown RBP14.61□□□□□ -0.07
XRN1-203ENST00000463916 FOSL2P15408 326 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 CD52P31358 61 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 NME8Q8N427 588 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 METTL13Q8N6R0 699 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 FBXO18Q8NFZ0 1043 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 RDM1Q8NG50 284 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 ZBED2Q9BTP6 218 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 TRPV2Q9Y5S1 764 aa14.61□□□□□ -0.07
XRN1-203ENST00000463916 LOXHD1Q8IVV2 1947 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 EPOPA6NHQ4 379 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 KIF28PB7ZC32 967 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 RFXAPO00287 272 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 SPIRE1Q08AE8 756 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 TSHZ1Q6ZSZ6 1077 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 TMEM40Q8WWA1 233 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 APBB2Q92870 758 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 TOP1MTQ969P6 601 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 TMX3Q96JJ7 454 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 FAM167AQ96KS9 214 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 PPP1R16BQ96T49 567 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 RAD9AQ99638 391 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 WRAP73Q9P2S5 460 aaPredicted RBP14.6□□□□□ -0.07
XRN1-203ENST00000463916 GINS2Q9Y248 185 aa14.6□□□□□ -0.07
XRN1-203ENST00000463916 TBX3O15119 743 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 ST18O60284 1047 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 UPP2O95045 317 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 AMHP03971 560 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 VTNP04004 478 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 RPLP2P05387 115 aaKnown RBP14.59□□□□□ -0.07
XRN1-203ENST00000463916 CLCN3P51790 818 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 HMGN5P82970 282 aaKnown RBP14.59□□□□□ -0.07
XRN1-203ENST00000463916 TARBP2Q15633 366 aaKnown RBP14.59□□□□□ -0.07
XRN1-203ENST00000463916 TMEM266Q2M3C6 531 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 RTN4RL1Q86UN2 441 aaPredicted RBP14.59□□□□□ -0.07
XRN1-203ENST00000463916 LRRC71Q8N4P6 559 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 LINC01465Q8N7H1 131 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 LINC01599Q8WXQ3 324 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 CEP89Q96ST8 783 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 NRBP2Q9NSY0 501 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 PADI3Q9ULW8 664 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 CEP131Q9UPN4 1083 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 ENPP3O14638 875 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 KIZQ2M2Z5 673 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 EFCAB12Q6NXP0 572 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 ANO5Q75V66 913 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 NAP1L4Q99733 375 aaKnown RBP14.59□□□□□ -0.07
XRN1-203ENST00000463916 NIFKQ9BYG3 293 aaKnown RBP14.59□□□□□ -0.07
XRN1-203ENST00000463916 KDM3AQ9Y4C1 1321 aa14.59□□□□□ -0.07
XRN1-203ENST00000463916 M0QZ92 97 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 GPR32O75388 356 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 ATP2B1P20020 1258 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 DRP2Q13474 957 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 FAM184AQ8NB25 1140 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 MAFAQ8NHW3 353 aaPredicted RBP14.58□□□□□ -0.08
XRN1-203ENST00000463916 BACH2Q9BYV9 841 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 TMEM60Q9H2L4 133 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 TMX1Q9H3N1 280 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 RGL1Q9NZL6 768 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 SEPT9Q9UHD8 586 aaPredicted RBP14.58□□□□□ -0.08
XRN1-203ENST00000463916 SQORQ9Y6N5 450 aa14.58□□□□□ -0.08
XRN1-203ENST00000463916 MARCH6O60337 910 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 PSMC5P62195 406 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 HTRA4P83105 476 aaPredicted RBP14.57□□□□□ -0.08
XRN1-203ENST00000463916 SAFBQ15424 915 aaKnown RBP eCLIP14.57□□□□□ -0.08
XRN1-203ENST00000463916 MTERF2Q49AM1 385 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 XKR3Q5GH77 459 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
XRN1-203ENST00000463916 ARNTL2Q8WYA1 636 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 MTMR9Q96QG7 549 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 SUGCTQ9HAC7 445 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 NOC2LQ9Y3T9 749 aaKnown RBP14.57□□□□□ -0.08
XRN1-203ENST00000463916 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 LINC01553A4QN01 128 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 DDX11L8A8MPP1 907 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 ZBTB39O15060 712 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms