RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CSADQ9Y600 493 aa14.11□□□□□ -0.15
VAPB-203ENST00000463370 RCCD1A6NED2 376 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 ZNF263O14978 683 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 EIF3DO15371 548 aaKnown RBP eCLIP14.1□□□□□ -0.15
VAPB-203ENST00000463370 CALUO43852 315 aaPredicted RBP14.1□□□□□ -0.15
VAPB-203ENST00000463370 PPP1R12BO60237 982 aaPredicted RBP14.1□□□□□ -0.15
VAPB-203ENST00000463370 USO1O60763 962 aaKnown RBP14.1□□□□□ -0.15
VAPB-203ENST00000463370 SLU7O95391 586 aaKnown RBP14.1□□□□□ -0.15
VAPB-203ENST00000463370 NPEPPSP55786 919 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 CNTN2Q02246 1040 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 KCNH2Q12809 1159 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 ZNF397Q8NF99 534 aaPredicted RBP14.1□□□□□ -0.15
VAPB-203ENST00000463370 RBM46Q8TBY0 533 aaKnown RBP14.1□□□□□ -0.15
VAPB-203ENST00000463370 LSM14BQ9BX40 385 aaKnown RBP14.1□□□□□ -0.15
VAPB-203ENST00000463370 NLRC4Q9NPP4 1024 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 GPRC5CQ9NQ84 441 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 KCND2Q9NZV8 630 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 PLAGL2Q9UPG8 496 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 KCNA2P16389 499 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 CYP27A1Q02318 531 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 SP4Q02446 784 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 ARHGAP29Q52LW3 1261 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 LBX2Q6XYB7 198 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 ARMCX3Q9UH62 379 aaPredicted RBP14.1□□□□□ -0.15
VAPB-203ENST00000463370 PCDHB13Q9Y5F0 798 aa14.1□□□□□ -0.15
VAPB-203ENST00000463370 WDR64B1ANS9 1081 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 LYPLA2O95372 231 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 HNRNPH3P31942 346 aaKnown RBP14.09□□□□□ -0.15
VAPB-203ENST00000463370 ZNF569Q5MCW4 686 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 GADL1Q6ZQY3 521 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 NEK11Q8NG66 645 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 ANKRD7Q92527 254 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 GPRASP2Q96D09 838 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 CDCA5Q96FF9 252 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 STRA6Q9BX79 667 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 ZNHIT6Q9NWK9 470 aaKnown RBP14.09□□□□□ -0.15
VAPB-203ENST00000463370 DBR1Q9UK59 544 aaKnown RBP14.09□□□□□ -0.15
VAPB-203ENST00000463370 PCNTO95613 3336 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 MYPNQ86TC9 1320 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 TISP43B9A030 160 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 PPP1R37O75864 691 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 ACTN1P12814 892 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 SP2Q02086 613 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 DCAF17Q5H9S7 520 aaPredicted RBP14.09□□□□□ -0.15
VAPB-203ENST00000463370 DPY19L2P1Q6NXN4 242 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 ANO5Q75V66 913 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 FRMD5Q7Z6J6 570 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 NLRX1Q86UT6 975 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 SLC35F6Q8N357 371 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 BORCS6Q96GS4 357 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 LACRTQ9GZZ8 138 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 SEL1LQ9UBV2 794 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 WDR90Q96KV7 1748 aa14.09□□□□□ -0.15
VAPB-203ENST00000463370 KIF5CO60282 957 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 ZNF862O60290 1169 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 TFRCP02786 760 aaKnown RBP14.08□□□□□ -0.16
VAPB-203ENST00000463370 POLR2FP61218 127 aaKnown RBP14.08□□□□□ -0.16
VAPB-203ENST00000463370 PSMC5P62195 406 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 KRT76Q01546 638 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 XRRA1Q6P2D8 792 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 PDXDC1Q6P996 788 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 C4orf19Q8IY42 314 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 MOV10L1Q9BXT6 1211 aaKnown RBP14.08□□□□□ -0.16
VAPB-203ENST00000463370 AGPAT3Q9NRZ7 376 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 DUSP10Q9Y6W6 482 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 PAPPA2Q9BXP8 1791 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 A0A0G2JLL6 359 aaPredicted RBP14.08□□□□□ -0.16
VAPB-203ENST00000463370 TLR2O60603 784 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 SLC9A1P19634 815 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 IREB2P48200 963 aaKnown RBP14.08□□□□□ -0.16
VAPB-203ENST00000463370 JAK3P52333 1124 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 SOX10P56693 466 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 PRRT2Q7Z6L0 340 aaPredicted RBP14.08□□□□□ -0.16
VAPB-203ENST00000463370 SLC35C1Q96A29 364 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 ERO1AQ96HE7 468 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 FAM184BQ9ULE4 1060 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 GUCA1BQ9UMX6 200 aa14.08□□□□□ -0.16
VAPB-203ENST00000463370 OTOFQ9HC10 1997 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 K7ENM7 598 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 EPHX2P34913 555 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 EIF4A3P38919 411 aaKnown RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 CYP2J2P51589 502 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 CDK17Q00537 523 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 ELF2Q15723 593 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 TCERG1LQ5VWI1 586 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 HGSNATQ68CP4 663 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 CACNA2D4Q7Z3S7 1137 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 ANKRD35Q8N283 1001 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 ZNF526Q8TF50 670 aaPredicted RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 IQCDQ96DY2 449 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 CARD6Q9BX69 1037 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 GANQ9H2C0 597 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 GABBR1Q9UBS5 961 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 TCEAL9Q9UHQ7 104 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 PCDHA10Q9Y5I2 948 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 MRFAP1Q9Y605 127 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 EIF3CLB5ME19 914 aaKnown RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 SLC16A3O15427 465 aaKnown RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 AFPP02771 609 aaKnown RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 EPB41P11171 864 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms