RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 RTL9Q8NET4 1388 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 A0A1W2PQH9 124 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 SLC22A31A6NKX4 558 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 KIAA1324LA8MWY0 1029 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-205ENST00000462254 PRR33A8MZF0 331 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 PLD2O14939 933 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 NRDCO43847 1150 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 SURF6O75683 361 aaKnown RBP5.57□□□□□ -1.52
CSMD3-205ENST00000462254 ATE1O95260 518 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 MMP10P09238 476 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 CD53P19397 219 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 SPINK2P20155 84 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 BDNFP23560 247 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 OXCT1P55809 520 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 NUCB1Q02818 461 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 MORC3Q14149 939 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 CBX2Q14781 532 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-205ENST00000462254 SLC10A5Q5PT55 438 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 FAM102BQ5T8I3 360 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 DTX1Q86Y01 620 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 IFNL3Q8IZI9 196 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 CNBD1Q8NA66 436 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 SIL1Q9H173 461 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 EPN3Q9H201 632 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 GREM2Q9H772 168 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 NCOA5Q9HCD5 579 aaKnown RBP5.57□□□□□ -1.52
CSMD3-205ENST00000462254 CASS4Q9NQ75 786 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 PCMTD2Q9NV79 361 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 INTS7Q9NVH2 962 aaKnown RBP5.57□□□□□ -1.52
CSMD3-205ENST00000462254 ANAPC4Q9UJX5 808 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 FBXO9Q9UK97 447 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-205ENST00000462254 TPX2Q9ULW0 747 aaKnown RBP5.57□□□□□ -1.52
CSMD3-205ENST00000462254 PLAGL2Q9UPG8 496 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 RPS6KL1Q9Y6S9 549 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 ZNF609O15014 1411 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 C10orf71Q711Q0 1435 aa5.57□□□□□ -1.52
CSMD3-205ENST00000462254 DICER1Q9UPY3 1922 aaKnown RBP5.56□□□□□ -1.52
CSMD3-205ENST00000462254 SBF1O95248 1867 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 CDK5RAP2Q96SN8 1893 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 SALL3Q9BXA9 1300 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 IQCA1LA6NCM1 817 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 SASH1O94885 1247 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 ITIH2P19823 946 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 YARSP54577 528 aaKnown RBP5.56□□□□□ -1.52
CSMD3-205ENST00000462254 R3HDM1Q15032 1099 aaKnown RBP5.56□□□□□ -1.52
CSMD3-205ENST00000462254 MLC1Q15049 377 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 SF3B3Q15393 1217 aaKnown RBP5.56□□□□□ -1.52
CSMD3-205ENST00000462254 GFOD2Q3B7J2 385 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 TMEM95Q3KNT9 176 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 LRRC24Q50LG9 513 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 ANKRD45Q5TZF3 282 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 KRBA2Q6ZNG9 492 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 DDX46Q7L014 1031 aaKnown RBP5.56□□□□□ -1.52
CSMD3-205ENST00000462254 ATG9AQ7Z3C6 839 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 TTC6Q86TZ1 520 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 CHD1LQ86WJ1 897 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 DGKHQ86XP1 1220 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 PASD1Q8IV76 773 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 AMOTL1Q8IY63 956 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 SLFN12Q8IYM2 578 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 DNAJB8Q8NHS0 232 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 CHMP4CQ96CF2 233 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 TM9SF2Q99805 663 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 PLCD4Q9BRC7 762 aa5.56□□□□□ -1.52
CSMD3-205ENST00000462254 TARS2Q9BW92 718 aaKnown RBP5.56□□□□□ -1.52
CSMD3-205ENST00000462254 PUS3Q9BZE2 481 aaKnown RBP5.56□□□□□ -1.52
CSMD3-205ENST00000462254 PRDM5Q9NQX1 630 aaPredicted RBP5.56□□□□□ -1.52
CSMD3-205ENST00000462254 DUOX1Q9NRD9 1551 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 MAST2Q6P0Q8 1798 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 SCN9AQ15858 1988 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 ANKRD18BA2A2Z9 1011 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 IGF2BP3O00425 579 aaKnown RBP eCLIP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 NPHP1O15259 732 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 RFPL1O75677 317 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 RGS3P49796 1198 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 ST5P78524 1137 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 PURAQ00577 322 aaKnown RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 IFIT5Q13325 482 aaKnown RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 MTMR1Q13613 665 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 NCAPHQ15003 741 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 CCDC57Q2TAC2 916 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 CRY2Q49AN0 593 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 CCDC152Q4G0S7 254 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 C10orf62Q5T681 223 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 RNF219Q5W0B1 726 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 OVOS1Q6IE37 1185 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 NFXL1Q6ZNB6 911 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 LRRTM3Q86VH5 581 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 C16orf71Q8IYS4 520 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 MAGEB6Q8N7X4 407 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 BAHD1Q8TBE0 780 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 OTUD7AQ8TE49 926 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 CYB5D2Q8WUJ1 264 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 CELF1Q92879 486 aaKnown RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 KISS1RQ969F8 398 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 HOOK2Q96ED9 719 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 KIF1BPQ96EK5 621 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 RTFDC1Q9BY42 306 aaPredicted RBP5.55□□□□□ -1.52
CSMD3-205ENST00000462254 LRRCC1Q9C099 1032 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 IL1RAPL2Q9NP60 686 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms