RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 ZNF561-AS1K7EIQ3 104 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 ARVCFO00192 962 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 TCF3P15923 654 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 MEOX1P50221 254 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 JAM2P57087 298 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 CD83Q01151 205 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 HHEXQ03014 270 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 HGFACQ04756 655 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 GRM7Q14831 915 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 KANK2Q63ZY3 851 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 TMEM200BQ69YZ2 307 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 C16orf59Q7L2K0 433 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 ADGRE4PQ86SQ3 457 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 RTKN2Q8IZC4 609 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 LARP4BQ92615 738 aaKnown RBP6.6□□□□□ -1.35
CFHR3-204ENST00000461558 PTPRN2Q92932 1015 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 AMNQ9BXJ7 453 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 CEP72Q9P209 647 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 Q9UFV3 132 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 PCDHA8Q9Y5H6 950 aa6.6□□□□□ -1.35
CFHR3-204ENST00000461558 CLASP2O75122 1294 aaKnown RBP6.59□□□□□ -1.35
CFHR3-204ENST00000461558 MAKP20794 623 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 ST5P78524 1137 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 LRSAM1Q6UWE0 723 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 SGMS1Q86VZ5 419 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 OR14K1Q8NGZ2 314 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 ZG16BQ96DA0 208 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 CRAMP1Q96RY5 1269 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 SPATA9Q9BWV2 254 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 GIT1Q9Y2X7 761 aa6.59□□□□□ -1.35
CFHR3-204ENST00000461558 SLC26A4O43511 780 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 ECE1P42892 770 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 GUCY1A3Q02108 690 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 RAB33AQ14088 237 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 CRY1Q16526 586 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 SCUBE1Q8IWY4 988 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 D2HGDHQ8N465 521 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 SHCBP1Q8NEM2 672 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 WDR48Q8TAF3 677 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 GMLQ99445 158 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 OR10A5Q9H207 317 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 SMURF1Q9HCE7 757 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 UCKL1Q9NWZ5 548 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 TNFRSF18Q9Y5U5 241 aa6.58□□□□□ -1.36
CFHR3-204ENST00000461558 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 PMS2P1A4D2B8 440 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 CAPN14A8MX76 684 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 KCNK3O14649 394 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 ADCY3O60266 1144 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 C6orf222P0C671 652 aaPredicted RBP6.57□□□□□ -1.36
CFHR3-204ENST00000461558 SRGAP2CP0DJJ0 459 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 MOGSQ13724 837 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 SEC23AQ15436 765 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 TMPRSS6Q8IU80 811 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 TMEM176AQ96HP8 235 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 AGO3Q9H9G7 860 aaKnown RBP6.57□□□□□ -1.36
CFHR3-204ENST00000461558 HECAQ9UBI9 543 aaPredicted RBP6.57□□□□□ -1.36
CFHR3-204ENST00000461558 FAM184BQ9ULE4 1060 aa6.57□□□□□ -1.36
CFHR3-204ENST00000461558 CCDC66A2RUB6 948 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 GSTA4O15217 222 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 MMEP08473 750 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 NAT1P18440 290 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 STAT5BP51692 787 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 SUMO1P63165 101 aaKnown RBP6.56□□□□□ -1.36
CFHR3-204ENST00000461558 FAM47CQ5HY64 1035 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
CFHR3-204ENST00000461558 GRAMD4Q6IC98 578 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 SPATC1Q76KD6 591 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 ZNF627Q7L945 461 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 MRGPRGQ86SM5 289 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 SLC43A3Q8NBI5 491 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 CLIP3Q96DZ5 547 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 CDC6Q99741 560 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 PARPBPQ9NWS1 579 aa6.56□□□□□ -1.36
CFHR3-204ENST00000461558 TRBV23-1A0A0A0MS06 115 aa6.55□□□□□ -1.36
CFHR3-204ENST00000461558 CYP27B1O15528 508 aa6.55□□□□□ -1.36
CFHR3-204ENST00000461558 PCSK4Q6UW60 755 aa6.55□□□□□ -1.36
CFHR3-204ENST00000461558 THEMISQ8N1K5 641 aaPredicted RBP6.55□□□□□ -1.36
CFHR3-204ENST00000461558 REXO2Q9Y3B8 237 aaKnown RBP6.55□□□□□ -1.36
CFHR3-204ENST00000461558 DNM2P50570 870 aa6.54□□□□□ -1.36
CFHR3-204ENST00000461558 LACTBP83111 547 aaPredicted RBP6.54□□□□□ -1.36
CFHR3-204ENST00000461558 CRHR2Q13324 411 aa6.54□□□□□ -1.36
CFHR3-204ENST00000461558 RIN1Q13671 783 aa6.54□□□□□ -1.36
CFHR3-204ENST00000461558 RRP1BQ14684 758 aaKnown RBP6.54□□□□□ -1.36
CFHR3-204ENST00000461558 FAM209AQ5JX71 171 aa6.54□□□□□ -1.36
CFHR3-204ENST00000461558 ASB15Q8WXK1 588 aa6.54□□□□□ -1.36
CFHR3-204ENST00000461558 AGAP2Q99490 1192 aa6.54□□□□□ -1.36
CFHR3-204ENST00000461558 TRIM55Q9BYV6 548 aa6.54□□□□□ -1.36
CFHR3-204ENST00000461558 MSRB2Q9Y3D2 182 aa6.54□□□□□ -1.36
CFHR3-204ENST00000461558 PCDHA9Q9Y5H5 950 aa6.54□□□□□ -1.36
CFHR3-204ENST00000461558 GABREP78334 506 aa6.53□□□□□ -1.36
CFHR3-204ENST00000461558 HNRNPA0Q13151 305 aaKnown RBP6.53□□□□□ -1.36
CFHR3-204ENST00000461558 TM4SF20Q53R12 229 aa6.53□□□□□ -1.36
CFHR3-204ENST00000461558 FOXB2Q5VYV0 432 aa6.53□□□□□ -1.36
CFHR3-204ENST00000461558 NOSTRINQ8IVI9 506 aa6.53□□□□□ -1.36
CFHR3-204ENST00000461558 ZC3H7AQ8IWR0 971 aaKnown RBP6.53□□□□□ -1.36
CFHR3-204ENST00000461558 MPHOSPH9Q99550 1183 aa6.53□□□□□ -1.36
CFHR3-204ENST00000461558 PRRX2Q99811 253 aa6.53□□□□□ -1.36
CFHR3-204ENST00000461558 SLC2A4RGQ9NR83 387 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms