RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 PTGISQ16647 500 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 ZNF484Q5JVG2 852 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 PLA2G4FQ68DD2 849 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 KCNK18Q7Z418 384 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 CABP7Q86V35 215 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 PIGOQ8TEQ8 1089 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 SEPT9Q9UHD8 586 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-202ENST00000461433 KIAA1024Q9UPX6 916 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 ATP11BQ9Y2G3 1177 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 MROH7Q68CQ1 1323 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 A0A087X0B3 334 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 RRN3P2A6NIE6 340 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 SLC26A4O43511 780 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 XRCC6P12956 609 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSBP1-202ENST00000461433 UBA7P41226 1012 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 IGBP1P78318 339 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 TMEM119Q4V9L6 283 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 WNT8BQ93098 351 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 NACC1Q96RE7 527 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 ANKEF1Q9NU02 776 aa12.61□□□□□ -0.39
SSBP1-202ENST00000461433 DDX19AQ9NUU7 478 aaKnown RBP12.61□□□□□ -0.39
SSBP1-202ENST00000461433 LOXHD1Q8IVV2 1947 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 E9PMD0 336 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 C22orf31O95567 290 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 KLRC1P26715 233 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 RARRES1P49788 294 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 KARSQ15046 597 aaKnown RBP12.6□□□□□ -0.39
SSBP1-202ENST00000461433 MTERF2Q49AM1 385 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 ADALQ6DHV7 355 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 MTHFD1LQ6UB35 978 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 CLEC17AQ6ZS10 378 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 SH3RF1Q7Z6J0 888 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 SERINC5Q86VE9 423 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 DHX38Q92620 1227 aaKnown RBP12.6□□□□□ -0.39
SSBP1-202ENST00000461433 PLIN2Q99541 437 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 HTATIP2Q9BUP3 242 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 CYP26B1Q9NR63 512 aa12.6□□□□□ -0.39
SSBP1-202ENST00000461433 DBR1Q9UK59 544 aaKnown RBP12.6□□□□□ -0.39
SSBP1-202ENST00000461433 TNRC18O15417 2968 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-202ENST00000461433 KDM3AQ9Y4C1 1321 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 IGKV6-21A0A0C4DH24 114 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 DCDC2CA8MYV0 355 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 GNAT1P11488 350 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 CYP2C9P11712 490 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 TRIM71Q2Q1W2 868 aaKnown RBP12.59□□□□□ -0.39
SSBP1-202ENST00000461433 XKR9Q5GH70 373 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 RESP18Q5W5W9 173 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 RUFY4Q6ZNE9 571 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 OTUD6AQ7L8S5 288 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 LINC01465Q8N7H1 131 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 CEP170P1Q96L14 293 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 NT5C3AQ9H0P0 336 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 PDLIM7Q9NR12 457 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 BLOC1S4Q9NUP1 217 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 TUBE1Q9UJT0 475 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 TBX21Q9UL17 535 aa12.59□□□□□ -0.39
SSBP1-202ENST00000461433 TRIM43BA6NCK2 446 aa12.58□□□□□ -0.4
SSBP1-202ENST00000461433 TLR3O15455 904 aaKnown RBP12.58□□□□□ -0.4
SSBP1-202ENST00000461433 MAFO75444 373 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-202ENST00000461433 CLTBP09497 229 aa12.58□□□□□ -0.4
SSBP1-202ENST00000461433 PLCG1P19174 1290 aa12.58□□□□□ -0.4
SSBP1-202ENST00000461433 PTK7Q13308 1070 aa12.58□□□□□ -0.4
SSBP1-202ENST00000461433 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-202ENST00000461433 ZRSR1Q15695 479 aaKnown RBP12.58□□□□□ -0.4
SSBP1-202ENST00000461433 NAALADL2Q58DX5 795 aa12.58□□□□□ -0.4
SSBP1-202ENST00000461433 KCTD17Q8N5Z5 321 aa12.58□□□□□ -0.4
SSBP1-202ENST00000461433 TRIM43Q96BQ3 446 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-202ENST00000461433 CALML4Q96GE6 196 aa12.58□□□□□ -0.4
SSBP1-202ENST00000461433 DHX33Q9H6R0 707 aaKnown RBP12.58□□□□□ -0.4
SSBP1-202ENST00000461433 PCDHA2Q9Y5H9 948 aa12.58□□□□□ -0.4
SSBP1-202ENST00000461433 EYA4O95677 639 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 CMA1P23946 247 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 PANK2Q9BZ23 570 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 BHMT2Q9H2M3 363 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 PCDH10Q9P2E7 1040 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 DNM3Q9UQ16 869 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 PPME1Q9Y570 386 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 SIP14410 1827 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 UMODL1Q5DID0 1318 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 FAM237AA0A1B0GTK4 181 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 SMIM35A0A1B0GVV1 85 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 A0A1W2PQ27 194 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 A0A1W2PQ64 194 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 A0A1W2PQD8 194 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 KIAA0355O15063 1070 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 MAGEB2O15479 319 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 EVI5O60447 810 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 ITGB8P26012 769 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 RBL2Q08999 1139 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 TBC1D8BQ0IIM8 1120 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 DRP2Q13474 957 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 E2F4Q16254 413 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 EFCAB12Q6NXP0 572 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 RPAINQ86UA6 219 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 C7orf61Q8IZ16 206 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 KIAA0319LQ8IZA0 1049 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 TMEM87AQ8NBN3 555 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 DPF3Q92784 378 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
SSBP1-202ENST00000461433 NOC4LQ9BVI4 516 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms