RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 U2AF1L4Q8WU68 220 aaKnown RBP13.19□□□□□ -0.3
GCOM1-203ENST00000460962 MBOAT7Q96N66 472 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 NEUROG2Q9H2A3 272 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 SUCLA2Q9P2R7 463 aaPredicted RBP13.19□□□□□ -0.3
GCOM1-203ENST00000460962 BTAF1O14981 1849 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 TBCAO75347 108 aaKnown RBP13.19□□□□□ -0.3
GCOM1-203ENST00000460962 GCNT3O95395 438 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 HNRNPH1P31943 449 aaKnown RBP13.19□□□□□ -0.3
GCOM1-203ENST00000460962 CASP4P49662 377 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 ZNF844Q08AG5 666 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 AP3B2Q13367 1082 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 BIRC3Q13489 604 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 YTHDF3Q7Z739 585 aaKnown RBP13.19□□□□□ -0.3
GCOM1-203ENST00000460962 ETNPPLQ8TBG4 499 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 SLC35C1Q96A29 364 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 SLITRK6Q9H5Y7 841 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 FBXL5Q9UKA1 691 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 A0A0A6YYK5 440 aaPredicted RBP13.18□□□□□ -0.3
GCOM1-203ENST00000460962 SRRM3A6NNA2 597 aaPredicted RBP13.18□□□□□ -0.3
GCOM1-203ENST00000460962 H0YGN5 161 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 CLIC2O15247 247 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 SLC16A3O15427 465 aaKnown RBP13.18□□□□□ -0.3
GCOM1-203ENST00000460962 DAPK3O43293 454 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 ITGA4P13612 1032 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 FAM182BQ5T319 152 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 MCTP2Q6DN12 878 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 GJB7Q6PEY0 223 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 SLFN11Q7Z7L1 901 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 CNPY4Q8N129 248 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 AJAP1Q9UKB5 411 aaPredicted RBP13.18□□□□□ -0.3
GCOM1-203ENST00000460962 NFS1Q9Y697 457 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 C10orf71Q711Q0 1435 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 RSPH10B2B2RC85 870 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 DDX3XO00571 662 aaKnown RBP eCLIP13.18□□□□□ -0.31e-13■■■■■ 33.4
GCOM1-203ENST00000460962 GFPT2O94808 682 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 FSBPO95073 299 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 RSPH10BP0C881 870 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 SPATA31C1P0DKV0 1188 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 FERP16591 822 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 JAM2P57087 298 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 CYP4A11Q02928 519 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 PPARDQ03181 441 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 RASGEF1CQ8N431 466 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 SIX2Q9NPC8 291 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 INTUQ9ULD6 942 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 ASTN1O14525 1302 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 ATP8B3O60423 1300 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 MEIS2O14770 477 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 TBX3O15119 743 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 ZBTB48P10074 688 aaPredicted RBP13.18□□□□□ -0.3
GCOM1-203ENST00000460962 MNAT1P51948 309 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 IFT88Q13099 833 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 NT5DC3Q86UY8 548 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 PRPF38AQ8NAV1 312 aaKnown RBP13.18□□□□□ -0.3
GCOM1-203ENST00000460962 BHMT2Q9H2M3 363 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 NENFQ9UMX5 172 aa13.18□□□□□ -0.3
GCOM1-203ENST00000460962 UTP11Q9Y3A2 253 aaKnown RBP13.18□□□□□ -0.3
GCOM1-203ENST00000460962 MYO1FO00160 1098 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 TTI1O43156 1089 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 STAT1P42224 750 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 SCNN1DP51172 638 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 STXBP5LQ9Y2K9 1186 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 SUGT1Q9Y2Z0 365 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 SPDYE3A6NKU9 549 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 BHMG1C9JSJ3 638 aaPredicted RBP13.17□□□□□ -0.3
GCOM1-203ENST00000460962 SLURP2P0DP57 97 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 FLT3P36888 993 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 GALCP54803 685 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 NPEPPSP55786 919 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 KCTD19Q17RG1 926 aaPredicted RBP13.17□□□□□ -0.3
GCOM1-203ENST00000460962 BMT2Q1RMZ1 405 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 KCNV1Q6PIU1 500 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 CYFIP2Q96F07 1278 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 CCDC17Q96LX7 622 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 DPH5Q9H2P9 285 aa13.17□□□□□ -0.3
GCOM1-203ENST00000460962 GTPBP10A4D1E9 387 aaKnown RBP13.16□□□□□ -0.3
GCOM1-203ENST00000460962 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
GCOM1-203ENST00000460962 EVI5O60447 810 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 SERPINB2P05120 415 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 FNTAP49354 379 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 KCNA1Q09470 495 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 TMC3Q7Z5M5 1100 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 CERS5Q8N5B7 392 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 HES6Q96HZ4 224 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 CELF4Q9BZC1 486 aaKnown RBP13.16□□□□□ -0.3
GCOM1-203ENST00000460962 FAM114A2Q9NRY5 505 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 SLC12A6Q9UHW9 1150 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 GMNCA6NCL1 334 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 FGGP02679 453 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
GCOM1-203ENST00000460962 DHX9Q08211 1270 aaKnown RBP13.16□□□□□ -0.3
GCOM1-203ENST00000460962 Q4G0T1 1027 aa13.16□□□□□ -0.3
GCOM1-203ENST00000460962 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms