RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 TMEM151BQ8IW70 566 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 LINC01356Q8N9X3 169 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 ZNF610Q8N9Z0 462 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 TP53I13Q8NBR0 393 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-204ENST00000459902 E2F7Q96AV8 911 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 FOXB1Q99853 325 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 BTBD2Q9BX70 525 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 NTMQ9P121 344 aa8.67□□□□□ -1.02
CKAP2-204ENST00000459902 NOP58Q9Y2X3 529 aaKnown RBP8.67□□□□□ -1.02
CKAP2-204ENST00000459902 UBA6A0AVT1 1052 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-204ENST00000459902 LCHNA4D1U4 455 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 DBX1A6NMT0 343 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 DDX3XO00571 662 aaKnown RBP eCLIP8.66□□□□□ -1.02
CKAP2-204ENST00000459902 ULK1O75385 1050 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 PRLP01236 227 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 ZNF28P17035 718 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 EVA1CP58658 441 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 SLC6A3Q01959 620 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 TTC38Q5R3I4 469 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 TCERG1LQ5VWI1 586 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 HDGFL2Q7Z4V5 671 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-204ENST00000459902 PRPF38AQ8NAV1 312 aaKnown RBP8.66□□□□□ -1.02
CKAP2-204ENST00000459902 CLRN3Q8NCR9 226 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 ZCCHC14Q8WYQ9 949 aaKnown RBP8.66□□□□□ -1.02
CKAP2-204ENST00000459902 ZNF496Q96IT1 587 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-204ENST00000459902 MAML3Q96JK9 1138 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 TOX2Q96NM4 488 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 TUBGCP5Q96RT8 1024 aa8.66□□□□□ -1.02
CKAP2-204ENST00000459902 KNG1P01042 644 aa8.65□□□□□ -1.02
CKAP2-204ENST00000459902 SARSP49591 514 aaKnown RBP8.65□□□□□ -1.02
CKAP2-204ENST00000459902 RGS3P49796 1198 aa8.65□□□□□ -1.02
CKAP2-204ENST00000459902 STILQ15468 1287 aa8.65□□□□□ -1.02
CKAP2-204ENST00000459902 TRMT10BQ6PF06 316 aaKnown RBP8.65□□□□□ -1.02
CKAP2-204ENST00000459902 DPP8Q6V1X1 898 aaPredicted RBP8.65□□□□□ -1.02
CKAP2-204ENST00000459902 SPATS2Q86XZ4 545 aaKnown RBP8.65□□□□□ -1.02
CKAP2-204ENST00000459902 C1QL4Q86Z23 238 aa8.65□□□□□ -1.02
CKAP2-204ENST00000459902 PHYKPLQ8IUZ5 450 aa8.65□□□□□ -1.02
CKAP2-204ENST00000459902 LRRC56Q8IYG6 542 aaPredicted RBP8.65□□□□□ -1.02
CKAP2-204ENST00000459902 CALML6Q8TD86 181 aa8.65□□□□□ -1.02
CKAP2-204ENST00000459902 OR10A5Q9H207 317 aa8.65□□□□□ -1.02
CKAP2-204ENST00000459902 SEMA4AQ9H3S1 761 aa8.65□□□□□ -1.02
CKAP2-204ENST00000459902 VTA1Q9NP79 307 aa8.65□□□□□ -1.02
CKAP2-204ENST00000459902 CHGBP05060 677 aa8.64□□□□□ -1.03
CKAP2-204ENST00000459902 SESN3P58005 492 aa8.64□□□□□ -1.03
CKAP2-204ENST00000459902 IQSEC1Q6DN90 963 aa8.64□□□□□ -1.03
CKAP2-204ENST00000459902 RASSF3Q86WH2 238 aa8.64□□□□□ -1.03
CKAP2-204ENST00000459902 CARFQ8N187 725 aa8.64□□□□□ -1.03
CKAP2-204ENST00000459902 C7orf31Q8N865 590 aa8.64□□□□□ -1.03
CKAP2-204ENST00000459902 COG1Q8WTW3 980 aa8.64□□□□□ -1.03
CKAP2-204ENST00000459902 ZDHHC5Q9C0B5 715 aa8.64□□□□□ -1.03
CKAP2-204ENST00000459902 MSRAQ9UJ68 235 aa8.64□□□□□ -1.03
CKAP2-204ENST00000459902 RAB11FIP3O75154 756 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 ROM1Q03395 351 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 MYBPC3Q14896 1274 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 PRAMEF9Q5VWM5 478 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 KANK2Q63ZY3 851 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 SLFN12LQ6IEE8 588 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 FRMD7Q6ZUT3 714 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 WDR48Q8TAF3 677 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 SPATA25Q9BR10 227 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 MYL10Q9BUA6 226 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 POFUT1Q9H488 388 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 SLC5A4Q9NY91 659 aa8.63□□□□□ -1.03
CKAP2-204ENST00000459902 NOC2LQ9Y3T9 749 aaKnown RBP8.63□□□□□ -1.03
CKAP2-204ENST00000459902 hCG_2014768A0A024R1R8 64 aa8.62□□□□□ -1.03
CKAP2-204ENST00000459902 H0Y858 1186 aa8.62□□□□□ -1.03
CKAP2-204ENST00000459902 ELL2O00472 640 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-204ENST00000459902 PRKD3O94806 890 aa8.62□□□□□ -1.03
CKAP2-204ENST00000459902 KLHL18O94889 574 aa8.62□□□□□ -1.03
CKAP2-204ENST00000459902 PRPF6O94906 941 aaKnown RBP8.62□□□□□ -1.03
CKAP2-204ENST00000459902 CD83Q01151 205 aa8.62□□□□□ -1.03
CKAP2-204ENST00000459902 MCTP2Q6DN12 878 aa8.62□□□□□ -1.03
CKAP2-204ENST00000459902 TIGD7Q6NT04 549 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-204ENST00000459902 CXXC5Q7LFL8 322 aaKnown RBP8.62□□□□□ -1.03
CKAP2-204ENST00000459902 RPUSD2Q8IZ73 545 aaKnown RBP8.62□□□□□ -1.03
CKAP2-204ENST00000459902 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
CKAP2-204ENST00000459902 L2HGDHQ9H9P8 463 aa8.62□□□□□ -1.03
CKAP2-204ENST00000459902 TOPORSQ9NS56 1045 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-204ENST00000459902 USP36Q9P275 1121 aaKnown RBP8.62□□□□□ -1.03
CKAP2-204ENST00000459902 APEX1P27695 318 aaKnown RBP8.61□□□□□ -1.03
CKAP2-204ENST00000459902 NOLC1Q14978 699 aaKnown RBP eCLIP8.61□□□□□ -1.03
CKAP2-204ENST00000459902 WDR72Q3MJ13 1102 aa8.61□□□□□ -1.03
CKAP2-204ENST00000459902 UNQ6494/PRO21346Q6UXR6 183 aa8.61□□□□□ -1.03
CKAP2-204ENST00000459902 NUDT10Q8NFP7 164 aa8.61□□□□□ -1.03
CKAP2-204ENST00000459902 NUDT11Q96G61 164 aa8.61□□□□□ -1.03
CKAP2-204ENST00000459902 YTHDC1Q96MU7 727 aaKnown RBP8.61□□□□□ -1.03
CKAP2-204ENST00000459902 KDM1AO60341 852 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 APOL3O95236 402 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 ADCY8P40145 1251 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 GUCY2FP51841 1108 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 SLURP1P55000 103 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 ANAPC15P60006 121 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 IGBP1P78318 339 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 FAM50AQ14320 339 aaKnown RBP8.6□□□□□ -1.03
CKAP2-204ENST00000459902 PDCD1Q15116 288 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 KANSL1Q7Z3B3 1105 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 NECAB2Q7Z6G3 386 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 CMIPQ8IY22 773 aa8.6□□□□□ -1.03
CKAP2-204ENST00000459902 TXNDC5Q8NBS9 432 aaKnown RBP8.6□□□□□ -1.03
CKAP2-204ENST00000459902 ZSCAN18Q8TBC5 510 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms