RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 C4orf19Q8IY42 314 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 METTL13Q8N6R0 699 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 BANK1Q8NDB2 785 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 VWCEQ96DN2 955 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 MAP7D2Q96T17 732 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 CXXC1Q9P0U4 656 aaPredicted RBP18.12■□□□□ 0.49
CD28-203ENST00000458610 SEPT9Q9UHD8 586 aaPredicted RBP18.12■□□□□ 0.49
CD28-203ENST00000458610 MSRAQ9UJ68 235 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 TRPV2Q9Y5S1 764 aa18.12■□□□□ 0.49
CD28-203ENST00000458610 DNAH12Q6ZR08 3092 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 LAD1O00515 517 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 C22orf31O95567 290 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 ATP2A2P16615 1042 aaKnown RBP18.11■□□□□ 0.49
CD28-203ENST00000458610 DNM2P50570 870 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 MBTPS1Q14703 1052 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 UGCGQ16739 394 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 KIAA0319LQ8IZA0 1049 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 DBF4BQ8NFT6 615 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 ERMNQ8TAM6 284 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 CELF4Q9BZC1 486 aaKnown RBP18.11■□□□□ 0.49
CD28-203ENST00000458610 RAB34Q9BZG1 259 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 STK24Q9Y6E0 443 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 CDY2AQ9Y6F7 541 aa18.11■□□□□ 0.49
CD28-203ENST00000458610 KDM3AQ9Y4C1 1321 aa18.1■□□□□ 0.49
CD28-203ENST00000458610 TMEM265A0A087WTH1 108 aa18.1■□□□□ 0.49
CD28-203ENST00000458610 ZBTB42B2RXF5 422 aa18.1■□□□□ 0.49
CD28-203ENST00000458610 SPIRE1Q08AE8 756 aa18.1■□□□□ 0.49
CD28-203ENST00000458610 MGAT3Q09327 533 aa18.1■□□□□ 0.49
CD28-203ENST00000458610 TARBP2Q15633 366 aaKnown RBP18.1■□□□□ 0.49
CD28-203ENST00000458610 ZNF697Q5TEC3 545 aa18.1■□□□□ 0.49
CD28-203ENST00000458610 EFCAB12Q6NXP0 572 aa18.1■□□□□ 0.49
CD28-203ENST00000458610 TPH2Q8IWU9 490 aa18.1■□□□□ 0.49
CD28-203ENST00000458610 TRIP12Q14669 1992 aaPredicted RBP18.1■□□□□ 0.49
CD28-203ENST00000458610 WNT7AO00755 349 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 AMHP03971 560 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 HSP90AA1P07900 732 aaKnown RBP18.09■□□□□ 0.49
CD28-203ENST00000458610 PDIA4P13667 645 aaKnown RBP18.09■□□□□ 0.49
CD28-203ENST00000458610 MTERF2Q49AM1 385 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 TSHZ1Q6ZSZ6 1077 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 BRAPQ7Z569 592 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 ZBTB10Q96DT7 871 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 DYDC2Q96IM9 177 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 EIF2AK1Q9BQI3 630 aaKnown RBP18.09■□□□□ 0.49
CD28-203ENST00000458610 LXNQ9BS40 222 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 IFIH1Q9BYX4 1025 aaKnown RBP18.09■□□□□ 0.49
CD28-203ENST00000458610 TMEM60Q9H2L4 133 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 SUGCTQ9HAC7 445 aa18.09■□□□□ 0.49
CD28-203ENST00000458610 SLITRK3O94933 977 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 STBD1O95210 358 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 LYPLA2O95372 231 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 GHRP10912 638 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 XRCC6P12956 609 aaKnown RBP eCLIP18.08■□□□□ 0.48
CD28-203ENST00000458610 YWHABP31946 246 aaKnown RBP18.08■□□□□ 0.48
CD28-203ENST00000458610 TECP42680 631 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 PDIA5Q14554 519 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 FBXO47Q5MNV8 452 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 CEP170P1Q96L14 293 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 HSD17B14Q9BPX1 270 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 FTHL17Q9BXU8 183 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 CYP26B1Q9NR63 512 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 RGL1Q9NZL6 768 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 AKT3Q9Y243 479 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 PCDHA11Q9Y5I1 949 aa18.08■□□□□ 0.48
CD28-203ENST00000458610 MAFO75444 373 aaPredicted RBP18.07■□□□□ 0.48
CD28-203ENST00000458610 DNAJB2P25686 324 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 RFC5P40937 340 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 PRPHP41219 470 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 TOB1P50616 345 aaPredicted RBP18.07■□□□□ 0.48
CD28-203ENST00000458610 CRYBB1P53674 252 aaPredicted RBP18.07■□□□□ 0.48
CD28-203ENST00000458610 WDR5P61964 334 aaKnown RBP18.07■□□□□ 0.48
CD28-203ENST00000458610 TMEM62Q0P6H9 643 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 PTGDRQ13258 359 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 CTTNQ14247 550 aaKnown RBP18.07■□□□□ 0.48
CD28-203ENST00000458610 LPIN1Q14693 890 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 ANO5Q75V66 913 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 DEFB123Q8N688 67 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 SLC7A3Q8WY07 619 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 TIFAQ96CG3 184 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 CCDC43Q96MW1 224 aaKnown RBP18.07■□□□□ 0.48
CD28-203ENST00000458610 ZBED2Q9BTP6 218 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 TUFT1Q9NNX1 390 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 ANKEF1Q9NU02 776 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 GINS2Q9Y248 185 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 PCDHB6Q9Y5E3 794 aa18.07■□□□□ 0.48
CD28-203ENST00000458610 MYH9P35579 1960 aaKnown RBP18.07■□□□□ 0.48
CD28-203ENST00000458610 TANC1Q9C0D5 1861 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 VPS37CA5D8V6 355 aaPredicted RBP18.06■□□□□ 0.48
CD28-203ENST00000458610 GRXCR1A8MXD5 290 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 GPR182O15218 404 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 GAS2O43903 313 aaKnown RBP18.06■□□□□ 0.48
CD28-203ENST00000458610 BMP15O95972 392 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 MUTP22033 750 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 FXR2P51116 673 aaKnown RBP eCLIP18.06■□□□□ 0.48
CD28-203ENST00000458610 CYP4A11Q02928 519 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 XKR9Q5GH70 373 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 HAUS3Q68CZ6 603 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 DTHD1Q6ZMT9 781 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 HERC6Q8IVU3 1022 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 C4orf32Q8N8J7 132 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms