RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 LRRC57Q8N9N7 239 aa12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 CCDC63Q8NA47 563 aa12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 ACTRT1Q8TDG2 376 aa12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 SYN2Q92777 582 aaPredicted RBP12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 TACO1Q9BSH4 297 aaKnown RBP12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 BCAS3Q9H6U6 928 aa12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 DDX25Q9UHL0 483 aaKnown RBP12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 PCDHA12Q9UN75 941 aa12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 ABCB11O95342 1321 aa12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 NHSL1Q5SYE7 1610 aa12.6□□□□□ -0.39
UBE2L3-202ENST00000458578 ATP6V1G2O95670 118 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 CCDC65Q8IXS2 484 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 ANKS4BQ8N8V4 417 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 IKZF4Q9H2S9 585 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 CHORDC1Q9UHD1 332 aaPredicted RBP12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 A0A1B0GUL6 1792 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 TMEM110-MUSTN1A8MSY1 372 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 FLOT1O75955 427 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 SLURP2P0DP57 97 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 GCFC2P16383 781 aaKnown RBP12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 SLC16A2P36021 539 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 MMP14P50281 582 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 IFI16Q16666 785 aaKnown RBP12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 AGBL2Q5U5Z8 902 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 OTUD6AQ7L8S5 288 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 CCDC25Q86WR0 208 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 SPZ1Q9BXG8 430 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 TMOD4Q9NZQ9 345 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 GGA2Q9UJY4 613 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 PCDHB13Q9Y5F0 798 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 KIF1CO43896 1103 aaKnown RBP12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 PLA2G4BP0C869 781 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 PSMD2Q13200 908 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 GLYCTKQ8IVS8 523 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 SWAP70Q9UH65 585 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 STK38LQ9Y2H1 464 aa12.59□□□□□ -0.39
UBE2L3-202ENST00000458578 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 RGS16O15492 202 aaPredicted RBP12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 C21orf2O43822 256 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 EDIL3O43854 480 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 FGFR4P22455 802 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 POTEGQ6S5H5 508 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 CCDC50Q8IVM0 306 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 KIF2BQ8N4N8 673 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 C1orf131Q8NDD1 294 aaKnown RBP12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 NSMCE1Q8WV22 266 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 ABCF3Q9NUQ8 709 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 INTS9Q9NV88 658 aaKnown RBP12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 SAMD15Q9P1V8 674 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 AMFRQ9UKV5 643 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 PPP1R9AQ9ULJ8 1098 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 CHRM1P11229 460 aaPredicted RBP12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 PON1P27169 355 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 SLC8A1P32418 973 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 CASP4P49662 377 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 GALCP54803 685 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 DR1Q01658 176 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 ADCY1Q08828 1119 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 PABPC4Q13310 644 aaKnown RBP eCLIP12.58□□□□□ -0.42e-45■■□□□ 11.9
UBE2L3-202ENST00000458578 XRCC4Q13426 336 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 SLC29A2Q14542 456 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 ERMARDQ5T6L9 678 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 DENND2CQ68D51 928 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 KSR1Q8IVT5 923 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 WDR66Q8TBY9 1149 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 FBXO25Q8TCJ0 367 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 EPS8L3Q8TE67 593 aaKnown RBP12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 DYDC1Q8WWB3 177 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 LZTS2Q9BRK4 669 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 FAM129AQ9BZQ8 928 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 NYXQ9GZU5 481 aa12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 DBR1Q9UK59 544 aaKnown RBP12.58□□□□□ -0.4
UBE2L3-202ENST00000458578 PHLPP1O60346 1717 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 A0A1B0GUA9 196 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 FOXO6A8MYZ6 492 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 CCDC188H7C350 402 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 XRCC5P13010 732 aaKnown RBP12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 NT5DC3Q86UY8 548 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 VPS36Q86VN1 386 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 PRCCQ92733 491 aaPredicted RBP12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 HAS1Q92839 578 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 CEP63Q96MT8 703 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■■■■■ 76.7
UBE2L3-202ENST00000458578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.57□□□□□ -0.44e-7■■□□□ 14.1
UBE2L3-202ENST00000458578 GCNT4Q9P109 453 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 SFI1A8K8P3 1242 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 TM4SF1P30408 202 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 PEX19P40855 299 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 PMS2P54278 862 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 KCNJ2P63252 427 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 CUL5Q93034 780 aa12.57□□□□□ -0.4
UBE2L3-202ENST00000458578 CALR3Q96L12 384 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms