RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 NCOA5Q9HCD5 579 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 FAM86C1Q9NVL1 165 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 TRPV2Q9Y5S1 764 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 ADGRA3Q8IWK6 1321 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 IPO5O00410 1097 aaKnown RBP17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 CCNE2O96020 404 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 CD52P31358 61 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 SLC26A2P50443 739 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 PKN1Q16512 942 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 PDXDC2PQ6P474 469 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 TRIM22Q8IYM9 498 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 IL17RAQ96F46 866 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 ZNF302Q9NR11 478 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 VPS54Q9P1Q0 977 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 CYP46A1Q9Y6A2 500 aa17.87■□□□□ 0.45
CHCHD3-204ENST00000457942 MYO7AQ13402 2215 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 CPLX1O14810 134 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 CYP3A4P08684 503 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 IBSPP21815 317 aaPredicted RBP17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 NDUFV1P49821 464 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 PAK2Q13177 524 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 SMAD4Q13485 552 aaKnown RBP17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 PRR16Q569H4 304 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 HERC4Q5GLZ8 1057 aaPredicted RBP17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 RUFY3Q7L099 469 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 CCDC60Q8IWA6 550 aaPredicted RBP17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 FBXL16Q8N461 479 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 C11orf84Q9BUA3 381 aaPredicted RBP17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 AGXT2Q9BYV1 514 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 ALG13Q9NP73 1137 aaKnown RBP17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 GINS2Q9Y248 185 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 PCDHA2Q9Y5H9 948 aa17.86■□□□□ 0.45
CHCHD3-204ENST00000457942 IGLV3-22A0A075B6J6 115 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 ADAMTS3O15072 1205 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 HBP1O60381 514 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 ATG7O95352 703 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 IFNAR1P17181 557 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 PDIA3P30101 505 aaKnown RBP17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 NLRP5P59047 1200 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 CTC1Q2NKJ3 1217 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 SWSAP1Q6NVH7 229 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 MTHFD1LQ6UB35 978 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 ABHD15Q6UXT9 468 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 TRMT1LQ7Z2T5 733 aaKnown RBP17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 ATP8B4Q8TF62 1192 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 CFAP54Q96N23 3096 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 TBC1D22BQ9NU19 505 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 CD207Q9UJ71 328 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 SAMM50Q9Y512 469 aa17.85■□□□□ 0.45
CHCHD3-204ENST00000457942 EVPLQ92817 2033 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 SMIM35A0A1B0GVV1 85 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 TMEM221A6NGB7 291 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 M0R296 226 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 LINC00271P0C7V0 271 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 BMPR1AP36894 532 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 KRT76Q01546 638 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 SSRP1Q08945 709 aaKnown RBP17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 NTRK3Q16288 839 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 PBXIP1Q96AQ6 731 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 FTHL17Q9BXU8 183 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 AGO3Q9H9G7 860 aaKnown RBP17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 TECTAO75443 2155 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 KIAA1671Q9BY89 1806 aa17.84■□□□□ 0.45
CHCHD3-204ENST00000457942 COL1A2P08123 1366 aa17.83■□□□□ 0.45
CHCHD3-204ENST00000457942 TTC3P53804 2025 aa17.83■□□□□ 0.45
CHCHD3-204ENST00000457942 IGKV6D-21A0A0A0MT36 114 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 ENPP3O14638 875 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 PSAPP07602 524 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 KLRC1P26715 233 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 PTPN5P54829 565 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 STK3Q13188 491 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 TOB2Q14106 344 aaPredicted RBP17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 BTG3Q14201 252 aaPredicted RBP17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 ZNF484Q5JVG2 852 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 ZNF746Q6NUN9 644 aaPredicted RBP17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 CPLX2Q6PUV4 134 aaKnown RBP17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 ADGRD2Q7Z7M1 963 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 SUGP1Q8IWZ8 645 aaKnown RBP17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 SMAP1Q8IYB5 467 aaPredicted RBP17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 CRYGNQ8WXF5 182 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 EDAQ92838 391 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 LARP6Q9BRS8 491 aaKnown RBP17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 CELF4Q9BZC1 486 aaKnown RBP17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 ZSWIM6Q9HCJ5 1215 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 RWDD3Q9Y3V2 267 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 PCDHGC5Q9Y5F6 944 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 SQORQ9Y6N5 450 aa17.83■□□□□ 0.44
CHCHD3-204ENST00000457942 KMT2EQ8IZD2 1858 aa17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 IGSF9BQ9UPX0 1349 aa17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 C5orf67F2Z3F1 127 aa17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 DHX15O43143 795 aaKnown RBP17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 NCK2O43639 380 aa17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 MMP1P03956 469 aa17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 NFX1Q12986 1120 aaKnown RBP17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 TMEM266Q2M3C6 531 aa17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 PAN2Q504Q3 1202 aaKnown RBP17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 TRIM67Q6ZTA4 783 aa17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 NME8Q8N427 588 aa17.82■□□□□ 0.44
CHCHD3-204ENST00000457942 PPP1R16BQ96T49 567 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms