RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 PFDN6O15212 129 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 SLMAPQ14BN4 828 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 STXBP2Q15833 593 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 SH2D4BQ5SQS7 431 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 C12orf60Q5U649 245 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 SRBD1Q8N5C6 995 aaKnown RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 RNF146Q9NTX7 359 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 TBC1D22BQ9NU19 505 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 HOXC10Q9NYD6 342 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 PNPLA7Q6ZV29 1317 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 ASPHQ12797 758 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 MUM1Q2TAK8 710 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 EP400NLQ6ZTU2 488 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 CATSPER4Q7RTX7 472 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 WHAMMQ8TF30 809 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 NSUN4Q96CB9 384 aaKnown RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 CEP72Q9P209 647 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 LDHAP00338 332 aaKnown RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 MT-ND3P03897 115 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 STAT3P40763 770 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 KNOP1Q1ED39 458 aaKnown RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 PRPF38AQ8NAV1 312 aaKnown RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 NSUN6Q8TEA1 469 aaKnown RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 SKA2Q8WVK7 121 aaPredicted RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 HDAC11Q96DB2 347 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 OSBPL5Q9H0X9 879 aaPredicted RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 CNOT8Q9UFF9 292 aaKnown RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 IPO5O00410 1097 aaKnown RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 PNMA6AP0CW24 399 aaPredicted RBP12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 CDO1Q16878 200 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 MUM1L1Q5H9M0 696 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 MAP3K21Q5TCX8 1036 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 ARHGEF18Q6ZSZ5 1173 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 PDIK1LQ8N165 341 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 ANAPC7Q9UJX3 599 aa12.63□□□□□ -0.39
SMARCAD1-204ENST00000457823 EXOC1LA0A1B0GW35 172 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 ZRANB2O95218 330 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 ARPP19P56211 112 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 MAPK6Q16659 721 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 SIX6OS1Q8N1H7 587 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 BBS5Q8N3I7 341 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 GUF1Q8N442 669 aaKnown RBP12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 SNX24Q9Y343 169 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 CCDC188H7C350 402 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 SART1O43290 800 aaKnown RBP12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 ATP2C1P98194 919 aaPredicted RBP12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 GFPT1Q06210 699 aaPredicted RBP12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 TRIM68Q6AZZ1 485 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 SCYL3Q8IZE3 742 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 OR6B3Q8NGW1 331 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 MIPOL1Q8TD10 442 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 FEM1BQ9UK73 627 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 ABCB11O95342 1321 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 MYO3BQ8WXR4 1341 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 DENND3A2RUS2 1198 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 ACSL3O95573 720 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 QARSP47897 775 aaKnown RBP12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 RCN2Q14257 317 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 KIAA1841Q6NSI8 718 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 PCGF5Q86SE9 256 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 BPIFA3Q9BQP9 254 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 FAM213AQ9BRX8 229 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 ZWILCHQ9H900 591 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 FNDC3AQ9Y2H6 1198 aaKnown RBP12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 SHROOM2Q13796 1616 aa12.62□□□□□ -0.39
SMARCAD1-204ENST00000457823 KRT76Q01546 638 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 EMBQ6PCB8 327 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 ARMCX2Q7L311 632 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 TCP11Q8WWU5 503 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 HEMGNQ9BXL5 484 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 IPO11Q9UI26 975 aaKnown RBP12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 ADGRG1Q9Y653 693 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 ERCC6L2Q5T890 1561 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 P4HBP07237 508 aaKnown RBP12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 FCER1AP12319 257 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 DBN1Q16643 649 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 PPP6R3Q5H9R7 873 aaPredicted RBP12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 ALS2CLQ60I27 953 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 ATP6V0A4Q9HBG4 840 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 FBXO40Q9UH90 709 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 ALKQ9UM73 1620 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 FAM205CA6NFA0 338 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 MYCP01106 439 aaPredicted RBP12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 NR1D1P20393 614 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 CA4P22748 312 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 NAA30Q147X3 362 aaPredicted RBP12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 MMEL1Q495T6 779 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 SWSAP1Q6NVH7 229 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 MYLK4Q86YV6 388 aaPredicted RBP12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 TMEM35BQ8NCS4 154 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 ZMYND12Q9H0C1 365 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 WDR91A4D1P6 747 aa12.61□□□□□ -0.39
SMARCAD1-204ENST00000457823 ZBED1O96006 694 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms