RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 HERC6Q8IVU3 1022 aa26.04■■□□□ 1.76
CBX3-204ENST00000456948 SMC3Q9UQE7 1217 aa26.04■■□□□ 1.76
CBX3-204ENST00000456948 TRPV2Q9Y5S1 764 aa26.04■■□□□ 1.76
CBX3-204ENST00000456948 FAM205CA6NFA0 338 aa26.03■■□□□ 1.76
CBX3-204ENST00000456948 P4HBP07237 508 aaKnown RBP26.03■■□□□ 1.76
CBX3-204ENST00000456948 ATP2B1P20020 1258 aa26.03■■□□□ 1.76
CBX3-204ENST00000456948 PBX2P40425 430 aa26.03■■□□□ 1.76
CBX3-204ENST00000456948 QARSP47897 775 aaKnown RBP26.03■■□□□ 1.76
CBX3-204ENST00000456948 TRAPPC10P48553 1259 aa26.03■■□□□ 1.76
CBX3-204ENST00000456948 NOSTRINQ8IVI9 506 aa26.03■■□□□ 1.76
CBX3-204ENST00000456948 EXOC8Q8IYI6 725 aa26.03■■□□□ 1.76
CBX3-204ENST00000456948 HAS1Q92839 578 aa26.03■■□□□ 1.76
CBX3-204ENST00000456948 MAP7D2Q96T17 732 aa26.03■■□□□ 1.76
CBX3-204ENST00000456948 CELF4Q9BZC1 486 aaKnown RBP26.03■■□□□ 1.76
CBX3-204ENST00000456948 VAV3Q9UKW4 847 aa26.03■■□□□ 1.76
CBX3-204ENST00000456948 H3BQV1 296 aa26.02■■□□□ 1.76
CBX3-204ENST00000456948 TLL1O43897 1013 aa26.02■■□□□ 1.76
CBX3-204ENST00000456948 GHRP10912 638 aa26.02■■□□□ 1.76
CBX3-204ENST00000456948 MGAT3Q09327 533 aa26.02■■□□□ 1.76
CBX3-204ENST00000456948 TBC1D8BQ0IIM8 1120 aa26.02■■□□□ 1.76
CBX3-204ENST00000456948 EPHA7Q15375 998 aa26.02■■□□□ 1.76
CBX3-204ENST00000456948 TSHZ1Q6ZSZ6 1077 aa26.02■■□□□ 1.76
CBX3-204ENST00000456948 JPH2Q9BR39 696 aaPredicted RBP26.02■■□□□ 1.76
CBX3-204ENST00000456948 SEPT9Q9UHD8 586 aaPredicted RBP26.02■■□□□ 1.76
CBX3-204ENST00000456948 DDX11L8A8MPP1 907 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 ZNF862O60290 1169 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 C22orf31O95567 290 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 DNM2P50570 870 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 RABGGTBP53611 331 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 CDC42EP1Q00587 391 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 FBXO47Q5MNV8 452 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 NCAPH2Q6IBW4 605 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 KIAA0319LQ8IZA0 1049 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 BANK1Q8NDB2 785 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 MYLIPQ8WY64 445 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 FTHL17Q9BXU8 183 aa26.01■■□□□ 1.75
CBX3-204ENST00000456948 NIFKQ9BYG3 293 aaKnown RBP26.01■■□□□ 1.75
CBX3-204ENST00000456948 KDM3AQ9Y4C1 1321 aa26■■□□□ 1.75
CBX3-204ENST00000456948 ZBTB42B2RXF5 422 aa26■■□□□ 1.75
CBX3-204ENST00000456948 MCM7P33993 719 aa26■■□□□ 1.75
CBX3-204ENST00000456948 TMEM62Q0P6H9 643 aa26■■□□□ 1.75
CBX3-204ENST00000456948 LPIN1Q14693 890 aa26■■□□□ 1.75
CBX3-204ENST00000456948 UGCGQ16739 394 aa26■■□□□ 1.75
CBX3-204ENST00000456948 PPP2R2DQ66LE6 453 aa26■■□□□ 1.75
CBX3-204ENST00000456948 EFCAB12Q6NXP0 572 aa26■■□□□ 1.75
CBX3-204ENST00000456948 OTUD6AQ7L8S5 288 aa26■■□□□ 1.75
CBX3-204ENST00000456948 ZBTB10Q96DT7 871 aa26■■□□□ 1.75
CBX3-204ENST00000456948 NKX2-4Q9H2Z4 354 aa26■■□□□ 1.75
CBX3-204ENST00000456948 TTC12Q9H892 705 aaPredicted RBP26■■□□□ 1.75
CBX3-204ENST00000456948 PPME1Q9Y570 386 aa26■■□□□ 1.75
CBX3-204ENST00000456948 WDR81Q562E7 1941 aa26■■□□□ 1.75
CBX3-204ENST00000456948 EVPLQ92817 2033 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 GJB2P29033 226 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 TXKP42681 527 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 MYOCDQ8IZQ8 938 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 NEK9Q8TD19 979 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 RAD9AQ99638 391 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 ZSWIM4Q9H7M6 989 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 SUGCTQ9HAC7 445 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 AKT3Q9Y243 479 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 GINS2Q9Y248 185 aa25.99■■□□□ 1.75
CBX3-204ENST00000456948 EML1O00423 815 aa25.98■■□□□ 1.75
CBX3-204ENST00000456948 CD2BP2O95400 341 aaKnown RBP25.98■■□□□ 1.75
CBX3-204ENST00000456948 U2AF2P26368 475 aaKnown RBP eCLIP25.98■■□□□ 1.75
CBX3-204ENST00000456948 PAK2Q13177 524 aa25.98■■□□□ 1.75
CBX3-204ENST00000456948 MTERF2Q49AM1 385 aa25.98■■□□□ 1.75
CBX3-204ENST00000456948 TTC38Q5R3I4 469 aa25.98■■□□□ 1.75
CBX3-204ENST00000456948 MCTP1Q6DN14 999 aa25.98■■□□□ 1.75
CBX3-204ENST00000456948 RNF216Q9NWF9 866 aaPredicted RBP25.98■■□□□ 1.75
CBX3-204ENST00000456948 GJB5O95377 273 aa25.97■■□□□ 1.75
CBX3-204ENST00000456948 CRYBB1P53674 252 aaPredicted RBP25.97■■□□□ 1.75
CBX3-204ENST00000456948 DEFB103AP81534 67 aa25.97■■□□□ 1.75
CBX3-204ENST00000456948 C4orf19Q8IY42 314 aa25.97■■□□□ 1.75
CBX3-204ENST00000456948 MTMR9Q96QG7 549 aa25.97■■□□□ 1.75
CBX3-204ENST00000456948 YBX2Q9Y2T7 364 aaKnown RBP25.97■■□□□ 1.75
CBX3-204ENST00000456948 INSL6Q9Y581 213 aa25.97■■□□□ 1.75
CBX3-204ENST00000456948 MYO9BQ13459 2157 aa25.97■■□□□ 1.75
CBX3-204ENST00000456948 RPS6KA5O75582 802 aa25.96■■□□□ 1.75
CBX3-204ENST00000456948 GRIN2CQ14957 1233 aa25.96■■□□□ 1.75
CBX3-204ENST00000456948 ZNF174Q15697 407 aa25.96■■□□□ 1.75
CBX3-204ENST00000456948 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.96■■□□□ 1.75
CBX3-204ENST00000456948 GAS2L1Q99501 681 aaPredicted RBP25.96■■□□□ 1.75
CBX3-204ENST00000456948 GPR182O15218 404 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 CA3P07451 260 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 FOSL2P15408 326 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 TARBP2Q15633 366 aaKnown RBP25.95■■□□□ 1.74
CBX3-204ENST00000456948 TMEM266Q2M3C6 531 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 LARP1BQ659C4 914 aaKnown RBP25.95■■□□□ 1.74
CBX3-204ENST00000456948 TPH2Q8IWU9 490 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 ERMNQ8TAM6 284 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 SLC7A3Q8WY07 619 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 SCLT1Q96NL6 688 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 LXNQ9BS40 222 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 PADI3Q9ULW8 664 aa25.95■■□□□ 1.74
CBX3-204ENST00000456948 GBF1Q92538 1859 aa25.94■■□□□ 1.74
CBX3-204ENST00000456948 OR52Z1P0C646 297 aa25.94■■□□□ 1.74
CBX3-204ENST00000456948 MYOGP15173 224 aa25.94■■□□□ 1.74
CBX3-204ENST00000456948 CD52P31358 61 aa25.94■■□□□ 1.74
CBX3-204ENST00000456948 CLCN3P51790 818 aa25.94■■□□□ 1.74
CBX3-204ENST00000456948 NFX1Q12986 1120 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms