RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 CD302Q8IX05 232 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 PDILTQ8N807 584 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 CAVIN3Q969G5 261 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 HVCN1Q96D96 273 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 ZBED3Q96IU2 234 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-218ENST00000456174 UBE2OQ9C0C9 1292 aaKnown RBP8.33□□□□□ -1.08
HDAC9-218ENST00000456174 KCNMB3Q9NPA1 279 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 TMCO1Q9UM00 188 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 PNMA6FA0A0J9YX94 578 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 A0A0U1RQJ8 604 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 TMEM221A6NGB7 291 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 AKR1B15C9JRZ8 316 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-218ENST00000456174 WNT10BO00744 389 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 POLR2DO15514 142 aaKnown RBP8.32□□□□□ -1.08
HDAC9-218ENST00000456174 DIAPH2O60879 1101 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 HSF2BPO75031 334 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 CDC25CP30307 473 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 SLC1A4P43007 532 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 MRPS35P82673 323 aaKnown RBP8.32□□□□□ -1.08
HDAC9-218ENST00000456174 MXRA7P84157 204 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 GUCY1A3Q02108 690 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 INF2Q27J81 1249 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 MFSD4BQ5TF39 518 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 HIBCHQ6NVY1 386 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-218ENST00000456174 EMBQ6PCB8 327 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 USP49Q70CQ1 688 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 SND1Q7KZF4 910 aaKnown RBP eCLIP8.32□□□□□ -1.08
HDAC9-218ENST00000456174 GSPT2Q8IYD1 628 aaKnown RBP8.32□□□□□ -1.08
HDAC9-218ENST00000456174 SYCP3Q8IZU3 236 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 AGAP11Q8TF27 550 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 DCAF4Q8WV16 495 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 MAIP1Q8WWC4 291 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 ATRIPQ8WXE1 791 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 LZICQ8WZA0 190 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 SLC35B4Q969S0 331 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 COA7Q96BR5 231 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 ARPC5LQ9BPX5 153 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 TMEM39BQ9GZU3 492 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 MYOZ2Q9NPC6 264 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 L3MBTL1Q9Y468 752 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 LTBP3Q9NS15 1303 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 ESYT2A0FGR8 921 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 USP17L10C9JJH3 530 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 N4BP3O15049 544 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 E2F6O75461 281 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 DESP17661 470 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 NR1D1P20393 614 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 TNFRSF8P28908 595 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 ATP1A2P50993 1020 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 SEC24CP53992 1094 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 RASSF7Q02833 373 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 CCDC15Q0P6D6 951 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 PNOCQ13519 176 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 KRT25Q7Z3Z0 450 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 FAM83AQ86UY5 434 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 GBP7Q8N8V2 638 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-218ENST00000456174 SMYD1Q8NB12 490 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 HDAC7Q8WUI4 952 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 EPSTI1Q96J88 318 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 GDAP1L1Q96MZ0 367 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 TRAPPC9Q96Q05 1148 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 RUFY1Q96T51 708 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 UNC45AQ9H3U1 944 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 PIDD1Q9HB75 910 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.32□□□□□ -1.08
HDAC9-218ENST00000456174 SPATA7Q9P0W8 599 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 MAPK8IP1Q9UQF2 711 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 TMEM98Q9Y2Y6 226 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
HDAC9-218ENST00000456174 F5H6K3 240 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 ZBTB5O15062 677 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 RPS12P25398 132 aaKnown RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 EPHB4P54760 987 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 KLRC3Q07444 240 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 NONOQ15233 471 aaKnown RBP eCLIP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 PAPD7Q5XG87 772 aaKnown RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 APBB1IPQ7Z5R6 666 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 SESTD1Q86VW0 696 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 ELOA2Q8IYF1 753 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 REXO1Q8N1G1 1221 aaKnown RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 C4orf32Q8N8J7 132 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 GMCL1P1Q8NEA9 526 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 NLGN2Q8NFZ4 835 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 SYMPKQ92797 1274 aaKnown RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 KCNN1Q92952 543 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 SEC16BQ96JE7 1060 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 RMDN2Q96LZ7 410 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 MMS19Q96T76 1030 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 ZCWPW1Q9H0M4 648 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 SERTAD1Q9UHV2 236 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 GMNCA6NCL1 334 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 E7EVH7 732 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 TBC1D12O60347 775 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 PPP1R11O60927 126 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 ZNF18P17022 549 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 NAT1P18440 290 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 ADCY7P51828 1080 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 PRELPP51888 382 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 ZNF280AP59817 542 aaPredicted RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 MDM2Q00987 491 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms