RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 KRCC1Q9NPI7 259 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 DBNLQ9UJU6 430 aaKnown RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ZNF215Q9UL58 517 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PI4KAP2A4QPH2 592 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TXNDC9O14530 226 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 TFDP1Q14186 410 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 STAT4Q14765 748 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 ARHGEF6Q15052 776 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 LETM2Q2VYF4 491 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 PI4KAP1Q8N8J0 262 aa5.58□□□□□ -1.52
CSMD3-204ENST00000455883 CDK5RAP2Q96SN8 1893 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 A8MXQ7 604 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 IGF2BP3O00425 579 aaKnown RBP eCLIP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 SOX6P35712 828 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CCT2P78371 535 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 NFIAQ12857 509 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 KRT81Q14533 505 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 YTHDF3Q7Z739 585 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TRMT44Q8IYL2 757 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 SYN2Q92777 582 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 DDX56Q9NY93 547 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 NEDD4P46934 1319 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 MYL4P12829 197 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ANXA11P50995 505 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TMEM259Q4ZIN3 620 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CCDC80Q76M96 950 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CXorf38Q8TB03 319 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 EPAS1Q99814 870 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 SLC8A2Q9UPR5 921 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ADCY9O60503 1353 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 H3BNX3 289 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 KDM1AO60341 852 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 DAB1O75553 588 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ESRRAP11474 423 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TAF12Q16514 161 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ITPRIPL1Q6GPH6 555 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ATP11CQ8NB49 1132 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 NUDCD1Q96RS6 583 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 SQORQ9Y6N5 450 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 WDR91A4D1P6 747 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TGFBR2P37173 567 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 COPB1P53618 953 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CASC4Q6P4E1 433 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CRELD2Q6UXH1 353 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 MIGA1Q8NAN2 632 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 PITPNM3Q9BZ71 974 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ATAD3AQ9NVI7 634 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ANKFY1Q9P2R3 1169 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 EFR3BQ9Y2G0 817 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 SLX4Q8IY92 1834 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 FMN2Q9NZ56 1722 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ITIH6Q6UXX5 1313 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 MYL6P60660 151 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CCZ1BP86790 482 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CCZ1P86791 482 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 SH3TC2Q8TF17 1288 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TSPAN17Q96FV3 270 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CTNNAL1Q9UBT7 734 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ZCCHC11Q5TAX3 1644 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CPP00450 1065 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 AGTP01019 485 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 KRT6AP02538 564 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 KRT6BP04259 564 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 SLFN14P0C7P3 912 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 FNTAP49354 379 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ITIH4Q14624 930 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 VSTM4Q8IW00 320 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 MRPL50Q8N5N7 158 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TRPC4APQ8TEL6 797 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 COG1Q8WTW3 980 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 EHD2Q9NZN4 543 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ADAM30Q9UKF2 790 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TLK1Q9UKI8 766 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 STARD13Q9Y3M8 1113 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 VWA3AA6NCI4 1184 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 OPLAHO14841 1288 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 OR52Z1P0C646 297 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TMEM132EQ6IEE7 984 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 USP13Q92995 863 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CARD9Q9H257 536 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 AFG3L2Q9Y4W6 797 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 SNX14Q9Y5W7 946 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 EXOC3O60645 756 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 MYL6BP14649 208 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 KRT6CP48668 564 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 FLAD1Q8NFF5 587 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 XPO4Q9C0E2 1151 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CTNND2Q9UQB3 1225 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ABCA6Q8N139 1617 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 PIGBOS1A0A0B4J2F0 54 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ZRANB2O95218 330 aaKnown RBP eCLIP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CAPN1P07384 714 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ZC3H6P61129 1189 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TRMT5Q32P41 509 aaKnown RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 AGBL2Q5U5Z8 902 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 HDAC7Q8WUI4 952 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CHMP6Q96FZ7 201 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TMEM191CA6NGB0 347 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 FAM107AO95990 144 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 TMEM191BP0C7N4 346 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms