RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 DDX19AQ9NUU7 478 aaKnown RBP15.97■□□□□ 0.15
HMGXB4-204ENST00000455359 SEPT9Q9UHD8 586 aaPredicted RBP15.97■□□□□ 0.15
HMGXB4-204ENST00000455359 TUBE1Q9UJT0 475 aa15.97■□□□□ 0.15
HMGXB4-204ENST00000455359 ATP11BQ9Y2G3 1177 aa15.97■□□□□ 0.15
HMGXB4-204ENST00000455359 PCDHA2Q9Y5H9 948 aa15.97■□□□□ 0.15
HMGXB4-204ENST00000455359 FRMPD3Q5JV73 1810 aa15.97■□□□□ 0.15
HMGXB4-204ENST00000455359 GAS2O43903 313 aaKnown RBP15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 B4GALT4O60513 344 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 EYA4O95677 639 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 RARRES1P49788 294 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 RBL2Q08999 1139 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 TBC1D8BQ0IIM8 1120 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 MARCH8Q5T0T0 291 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 CCDC155Q8N6L0 562 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 RETREG2Q8NC44 543 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 RASSF8Q8NHQ8 419 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 CEP170P1Q96L14 293 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 CCDC43Q96MW1 224 aaKnown RBP15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 CEP89Q96ST8 783 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 TRPV6Q9H1D0 765 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 TRMT13Q9NUP7 481 aaKnown RBP15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 FAM13BQ9NYF5 915 aa15.96■□□□□ 0.15
HMGXB4-204ENST00000455359 IGKV6-21A0A0C4DH24 114 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 DGAT1O75907 488 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 C22orf31O95567 290 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 CLTBP09497 229 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 KLRC1P26715 233 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 TMOD1P28289 359 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 CDC42EP1Q00587 391 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 FAAP100Q0VG06 881 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 GRB10Q13322 594 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 ECM1Q16610 540 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 XKR9Q5GH70 373 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 RESP18Q5W5W9 173 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 SHC4Q6S5L8 630 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 MTHFD1LQ6UB35 978 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 RSPH3Q86UC2 560 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 NME8Q8N427 588 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 TMEM87AQ8NBN3 555 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 CAGE1Q8TC20 777 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 SLC7A3Q8WY07 619 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 EPSTI1Q96J88 318 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 PNMA5Q96PV4 448 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 KCND2Q9NZV8 630 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 STK17AQ9UEE5 414 aa15.95■□□□□ 0.14
HMGXB4-204ENST00000455359 SMIM35A0A1B0GVV1 85 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 GOLGA6L4A6NEF3 574 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 PITPNM1O00562 1244 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 TREHO43280 583 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 EVI5O60447 810 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 MAFO75444 373 aaPredicted RBP15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 IGBP1P78318 339 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 BFSP2Q13515 415 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 HIC1Q14526 733 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 MTERF2Q49AM1 385 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 USP49Q70CQ1 688 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 CHAMP1Q96JM3 812 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 CTAGE1Q96RT6 745 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 CUEDC2Q9H467 287 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 DHX33Q9H6R0 707 aaKnown RBP15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 TMEM39AQ9NV64 488 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 TBX21Q9UL17 535 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 NR2E3Q9Y5X4 410 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 FAM237AA0A1B0GTK4 181 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 ARHGEF35A5YM69 484 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 KIAA0355O15063 1070 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 CYP2C9P11712 490 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 PLCG1P19174 1290 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 DNM2P50570 870 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 POLGP54098 1239 aaPredicted RBP15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 KARSQ15046 597 aaKnown RBP15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 ZRSR1Q15695 479 aaKnown RBP15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 SPECC1Q5M775 1068 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 RRAGBQ5VZM2 374 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 PLA2G4FQ68DD2 849 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 TRMT1LQ7Z2T5 733 aaKnown RBP15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 IQUBQ8NA54 791 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 MCPH1Q8NEM0 835 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 PIGOQ8TEQ8 1089 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 DPF3Q92784 378 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 GBP4Q96PP9 640 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 TIPINQ9BVW5 301 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 BHMT2Q9H2M3 363 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 PRKAG2Q9UGJ0 569 aa15.94■□□□□ 0.14
HMGXB4-204ENST00000455359 PARNO95453 639 aaKnown RBP15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 CYP11B2P19099 503 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 NPEPPSP55786 919 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 ZNF200P98182 395 aaPredicted RBP15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 PADI6Q6TGC4 694 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 FAM43BQ6ZT52 329 aaPredicted RBP15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 LINC01465Q8N7H1 131 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 SYT2Q8N9I0 419 aaPredicted RBP15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 TRAPPC12Q8WVT3 735 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 TCP11Q8WWU5 503 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 MAP7D2Q96T17 732 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 MAGEF1Q9HAY2 307 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 ATP6V0A4Q9HBG4 840 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 GDPD2Q9HCC8 539 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 PDLIM7Q9NR12 457 aa15.93■□□□□ 0.14
HMGXB4-204ENST00000455359 USP25Q9UHP3 1055 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms