RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 KRT1P04264 644 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 U2AF1L5P0DN76 240 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 RAC2P15153 192 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 FAHP16930 419 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 ENPP1P22413 925 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 CCND1P24385 295 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 AFMP43652 599 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 U2AF1Q01081 240 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 SLC9A5Q14940 896 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 NR1I3Q14994 352 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 MLC1Q15049 377 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 PKN1Q16512 942 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 FSCN1Q16658 493 aaKnown RBP4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 PAN2Q504Q3 1202 aaKnown RBP4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 MIB1Q86YT6 1006 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 KIRREL1Q96J84 757 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 FAM84AQ96KN4 292 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 SEMA4AQ9H3S1 761 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 ZNF277Q9NRM2 450 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 CCM2LQ9NUG4 571 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 MKS1Q9NXB0 559 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 BTBD7Q9P203 1132 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 MSRAQ9UJ68 235 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 YBX2Q9Y2T7 364 aaKnown RBP4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 ASB1Q9Y576 335 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 MRFAP1Q9Y605 127 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 KLHL33A6NCF5 533 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 GOLGA6CA6NDK9 693 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 GOLGA6BA6NDN3 693 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 PRAMEF25A6NGN4 478 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 F8W031 263 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 ZRANB2O95218 330 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 GLI1P08151 1106 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 MMEP08473 750 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 TMEM253P0C7T8 217 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 GOLGA6DP0CG33 693 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 AOAHP28039 575 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 MTNR1BP49286 362 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 MANFP55145 182 aaKnown RBP4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 GTF2H3Q13889 308 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 KCNK18Q7Z418 384 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 CXorf67Q86X51 503 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 PHYKPLQ8IUZ5 450 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 AMOTL1Q8IY63 956 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 CCDC146Q8IYE0 955 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 AIFM3Q96NN9 605 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 GBP4Q96PP9 640 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 RNF32Q9H0A6 362 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 WNT8AQ9H1J5 351 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 RXFP1Q9HBX9 757 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 GOLGA6AQ9NYA3 693 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 BCCIPQ9P287 314 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 TMPRSS11EQ9UL52 423 aa4.93□□□□□ -1.62
HMGB1P15-201ENST00000453854 ELL2O00472 640 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 CAND2O75155 1236 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 LRG1P02750 347 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 PF4V1P10720 104 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 ATF3P18847 181 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 VCAM1P19320 739 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 THBS2P35442 1172 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 MAPKAPK2P49137 400 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 GALK1P51570 392 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 YBX1P67809 324 aaKnown RBP4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 HTRA3P83110 453 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 PRR5P85299 388 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 GRIN1Q05586 938 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 DBPQ10586 325 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 GFOD2Q3B7J2 385 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 FBLN7Q53RD9 439 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 RPTNQ6XPR3 784 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 ESPNLQ6ZVH7 1005 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 KANSL1Q7Z3B3 1105 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 PNMA8AQ86V59 439 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 TPH2Q8IWU9 490 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 CCAR1Q8IX12 1150 aaKnown RBP4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 SIRT2Q8IXJ6 389 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 FAM126BQ8IXS8 530 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 JADE3Q92613 823 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 HSPBAP1Q96EW2 488 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 MAML3Q96JK9 1138 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 SLC38A3Q99624 504 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 FAM53CQ9NYF3 392 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 KCNG1Q9UIX4 513 aa4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 NOB1Q9ULX3 412 aaKnown RBP4.92□□□□□ -1.62
HMGB1P15-201ENST00000453854 UBA6A0AVT1 1052 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 MPIG6BO95866 241 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 MPOP05164 745 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 AGXTP21549 392 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 LPOP22079 712 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 CFPP27918 469 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 CYP2C19P33261 490 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 MAP9Q49MG5 647 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 TTC38Q5R3I4 469 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 EFCAB2Q5VUJ9 269 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 MPZL3Q6UWV2 235 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 EPM2AIP1Q7L775 607 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 PROSER1Q86XN7 944 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms