RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 GRXCR1A8MXD5 290 aa16.46■□□□□ 0.23
VPS16-205ENST00000453689 CHRNA1P02708 482 aa16.46■□□□□ 0.23
VPS16-205ENST00000453689 MCM7P33993 719 aa16.46■□□□□ 0.23
VPS16-205ENST00000453689 SPIRE1Q08AE8 756 aa16.46■□□□□ 0.23
VPS16-205ENST00000453689 ORC2Q13416 577 aaPredicted RBP16.46■□□□□ 0.23
VPS16-205ENST00000453689 TTC38Q5R3I4 469 aa16.46■□□□□ 0.23
VPS16-205ENST00000453689 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
VPS16-205ENST00000453689 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
VPS16-205ENST00000453689 BANK1Q8NDB2 785 aa16.46■□□□□ 0.23
VPS16-205ENST00000453689 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
VPS16-205ENST00000453689 MTMR9Q96QG7 549 aa16.46■□□□□ 0.23
VPS16-205ENST00000453689 NLRC5Q86WI3 1866 aa16.46■□□□□ 0.22
VPS16-205ENST00000453689 SMIM35A0A1B0GVV1 85 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 BAIAP3O94812 1187 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 STBD1O95210 358 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 C22orf31O95567 290 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 RPLP2P05387 115 aaKnown RBP16.45■□□□□ 0.22
VPS16-205ENST00000453689 TOB1P50616 345 aaPredicted RBP16.45■□□□□ 0.22
VPS16-205ENST00000453689 MRPS6P82932 125 aaKnown RBP16.45■□□□□ 0.22
VPS16-205ENST00000453689 PLEKHG4Q58EX7 1191 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 NCAPH2Q6IBW4 605 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 TMEM60Q9H2L4 133 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 NRBP2Q9NSY0 501 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 CEP131Q9UPN4 1083 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 ZDHHC9Q9Y397 364 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 CDY2AQ9Y6F7 541 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 SLC4A7Q9Y6M7 1214 aa16.45■□□□□ 0.22
VPS16-205ENST00000453689 PSMC5P62195 406 aa16.44■□□□□ 0.22
VPS16-205ENST00000453689 EPHA7Q15375 998 aa16.44■□□□□ 0.22
VPS16-205ENST00000453689 ZNF174Q15697 407 aa16.44■□□□□ 0.22
VPS16-205ENST00000453689 DBF4BQ8NFT6 615 aa16.44■□□□□ 0.22
VPS16-205ENST00000453689 TTC12Q9H892 705 aaPredicted RBP16.44■□□□□ 0.22
VPS16-205ENST00000453689 PCDHA12Q9UN75 941 aa16.44■□□□□ 0.22
VPS16-205ENST00000453689 MYO9BQ13459 2157 aa16.44■□□□□ 0.22
VPS16-205ENST00000453689 TMEM150BA6NC51 233 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 P4HBP07237 508 aaKnown RBP16.43■□□□□ 0.22
VPS16-205ENST00000453689 DNAJB2P25686 324 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 PBX2P40425 430 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 TXKP42681 527 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 QARSP47897 775 aaKnown RBP16.43■□□□□ 0.22
VPS16-205ENST00000453689 WDR5P61964 334 aaKnown RBP16.43■□□□□ 0.22
VPS16-205ENST00000453689 TMEM62Q0P6H9 643 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 IKBKEQ14164 716 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 NBR1Q14596 966 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 TARBP2Q15633 366 aaKnown RBP16.43■□□□□ 0.22
VPS16-205ENST00000453689 XKR3Q5GH77 459 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 Q7L0L9 218 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 NIFKQ9BYG3 293 aaKnown RBP16.43■□□□□ 0.22
VPS16-205ENST00000453689 PBX4Q9BYU1 374 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 CHMP5Q9NZZ3 219 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 WRAP73Q9P2S5 460 aaPredicted RBP16.43■□□□□ 0.22
VPS16-205ENST00000453689 SEPT9Q9UHD8 586 aaPredicted RBP16.43■□□□□ 0.22
VPS16-205ENST00000453689 TRPV2Q9Y5S1 764 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 TTC3P53804 2025 aa16.43■□□□□ 0.22
VPS16-205ENST00000453689 ABHD14A-ACY1A0A1B0GW23 586 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 M0QZ92 97 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 SLC34A2O95436 690 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 GHRP10912 638 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 ATP2A2P16615 1042 aaKnown RBP16.42■□□□□ 0.22
VPS16-205ENST00000453689 DEFB103AP81534 67 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 LPIN1Q14693 890 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 MTERF2Q49AM1 385 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 IER5Q5VY09 327 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 FAM173BQ6P4H8 233 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 KIAA0319LQ8IZA0 1049 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 NME8Q8N427 588 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 SEPT8Q92599 483 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 DYDC2Q96IM9 177 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 SLC9A7Q96T83 725 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.42■□□□□ 0.22
VPS16-205ENST00000453689 RGL1Q9NZL6 768 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 PCDHB6Q9Y5E3 794 aa16.42■□□□□ 0.22
VPS16-205ENST00000453689 DDX11L8A8MPP1 907 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 MAGEB2O15479 319 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 DKC1O60832 514 aaKnown RBP eCLIP16.41■□□□□ 0.22
VPS16-205ENST00000453689 KCNJ6P48051 423 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 CLCN3P51790 818 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 RABGGTBP53611 331 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
VPS16-205ENST00000453689 FBXO47Q5MNV8 452 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 ZNF697Q5TEC3 545 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 PLA2G4FQ68DD2 849 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 EFCAB12Q6NXP0 572 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 ANO5Q75V66 913 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 DEFB123Q8N688 67 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 METTL13Q8N6R0 699 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 LINC01465Q8N7H1 131 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 PHOSPHO2Q8TCD6 241 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 ZNF396Q96N95 335 aaPredicted RBP16.41■□□□□ 0.22
VPS16-205ENST00000453689 CEP89Q96ST8 783 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 EIF2AK1Q9BQI3 630 aaKnown RBP16.41■□□□□ 0.22
VPS16-205ENST00000453689 SH2D3AQ9BRG2 576 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 LXNQ9BS40 222 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 IFIH1Q9BYX4 1025 aaKnown RBP16.41■□□□□ 0.22
VPS16-205ENST00000453689 CELF4Q9BZC1 486 aaKnown RBP16.41■□□□□ 0.22
VPS16-205ENST00000453689 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 KDM3AQ9Y4C1 1321 aa16.41■□□□□ 0.22
VPS16-205ENST00000453689 KIAA1671Q9BY89 1806 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 RALGAPA2Q2PPJ7 1873 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 POTEMA6NI47 508 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms