RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CERS4Q9HA82 394 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 VTA1Q9NP79 307 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 VPS45Q9NRW7 570 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 IRAK4Q9NWZ3 460 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 NFKBIL1Q9UBC1 381 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 PCDHA4Q9UN74 947 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 HDAC5Q9UQL6 1122 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 FSD2A1L4K1 749 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 KLHL33A6NCF5 533 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 DCDC2CA8MYV0 355 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 GOLGA6L22H0YM25 854 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 EIF3FO00303 357 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 HRGP04196 525 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 AKAP5P24588 427 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 NTF4P34130 210 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 BPIFB3P59826 476 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 KRT85P78386 507 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 CYP27A1Q02318 531 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 MLECQ14165 292 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 ACAP2Q15057 778 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 MSMPQ1L6U9 139 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 PPM1JQ5JR12 505 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 DGKKQ5KSL6 1271 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 FKBP15Q5T1M5 1219 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 DARS2Q6PI48 645 aaKnown RBP5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 ENOSF1Q7L5Y1 443 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 DPP9Q86TI2 863 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 ANKLE2Q86XL3 938 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 DTX1Q86Y01 620 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 NXPE1Q8N323 547 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 TEX9Q8N6V9 391 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZNF513Q8N8E2 541 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 GSTCDQ8NEC7 633 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 SLC30A5Q8TAD4 765 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 SNX21Q969T3 373 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 ELMO3Q96BJ8 720 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 SCLYQ96I15 445 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 ACO2Q99798 780 aaKnown RBP5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 FAM167BQ9BTA0 163 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 ABCG4Q9H172 646 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 TRIT1Q9H3H1 467 aaKnown RBP5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 SMOC1Q9H4F8 434 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 PICK1Q9NRD5 415 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 ATP8A2Q9NTI2 1148 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 ARGLU1Q9NWB6 273 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 C14orf119Q9NWQ9 140 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 CCDC39Q9UFE4 941 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 GIMAP2Q9UG22 337 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 POLHQ9Y253 713 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 TMEM98Q9Y2Y6 226 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 CSADQ9Y600 493 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 SNCAIPQ9Y6H5 919 aa5.08□□□□□ -1.6
HMGB3P21-201ENST00000452483 A0A087WV62 115 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 B4E171 279 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 CYP26A1O43174 497 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 GAS7O60861 476 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 TBC1D8O95759 1140 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 TBX18O95935 607 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 C6orf222P0C671 652 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 DHRS4L1P0CG22 281 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 ACRP10323 421 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 MTHFD1P11586 935 aaKnown RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 ATF7P17544 494 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 STAT1P42224 750 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZNF143P52747 638 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 ATXN1P54253 815 aaKnown RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 RPL6Q02878 288 aaKnown RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 SEMA5AQ13591 1074 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 PPP2R5DQ14738 602 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 DDB1Q16531 1140 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 HECTD3Q5T447 861 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 ERICH6BQ5W0A0 696 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 DSTYKQ6XUX3 929 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 CCDC73Q6ZRK6 1079 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 WAPLQ7Z5K2 1190 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 GRAMD1CQ8IYS0 662 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 ESX1Q8N693 406 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 PCYOX1LQ8NBM8 494 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 LRRN4CLQ8ND94 238 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 SMC1BQ8NDV3 1235 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 MGARPQ8TDB4 240 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 N4BP2L2Q92802 583 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 OSBP2Q969R2 916 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 KIAA1191Q96A73 305 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 GTPBP4Q9BZE4 634 aaKnown RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 ELAC1Q9H777 363 aaKnown RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 SSU72Q9NP77 194 aaKnown RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 UBN1Q9NPG3 1134 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 ITM2CQ9NQX7 267 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 PDRG1Q9NUG6 133 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 XPO7Q9UIA9 1087 aaKnown RBP5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 PCOLCE2Q9UKZ9 415 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 GPR34Q9UPC5 381 aa5.07□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 TCRBV16S1A1N1A0A5B0 115 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PRAMEF27A3QJZ7 478 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 FAM227AF5H4B4 570 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 MPHOSPH10O00566 681 aaKnown RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 P4HA2O15460 535 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms