RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 GUCY1A3Q02108 690 aa12.18□□□□□ -0.46
DDR1-239ENST00000452441 FAM102BQ5T8I3 360 aa12.18□□□□□ -0.46
DDR1-239ENST00000452441 APOBEC3HQ6NTF7 200 aaKnown RBP12.18□□□□□ -0.46
DDR1-239ENST00000452441 TMOD4Q9NZQ9 345 aa12.18□□□□□ -0.46
DDR1-239ENST00000452441 AMACRQ9UHK6 382 aa12.18□□□□□ -0.46
DDR1-239ENST00000452441 KDM3AQ9Y4C1 1321 aa12.18□□□□□ -0.46
DDR1-239ENST00000452441 TMEM150BA6NC51 233 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 EIF3CLB5ME19 914 aaKnown RBP12.17□□□□□ -0.46
DDR1-239ENST00000452441 TCP1P17987 556 aaKnown RBP12.17□□□□□ -0.46
DDR1-239ENST00000452441 TNNC1P63316 161 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 CETN1Q12798 172 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 BIRC3Q13489 604 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 PPP1R18Q6NYC8 613 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 STXBP4Q6ZWJ1 553 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 CPLX4Q7Z7G2 160 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 CEP57Q86XR8 500 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 ZNF507Q8TCN5 953 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 ZNF526Q8TF50 670 aaPredicted RBP12.17□□□□□ -0.46
DDR1-239ENST00000452441 DYDC2Q96IM9 177 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 PNMA5Q96PV4 448 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 EIF3CQ99613 913 aaKnown RBP12.17□□□□□ -0.46
DDR1-239ENST00000452441 CELF4Q9BZC1 486 aaKnown RBP12.17□□□□□ -0.46
DDR1-239ENST00000452441 STK17AQ9UEE5 414 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 NF2P35240 595 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 CASP5P51878 434 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 PLTPP55058 493 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 NNTQ13423 1086 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 LMBRD2Q68DH5 695 aaPredicted RBP12.17□□□□□ -0.46
DDR1-239ENST00000452441 SLFN12Q8IYM2 578 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 BLOC1S4Q9NUP1 217 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 H2AFZP0C0S5 128 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 DPEP1P16444 411 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 GCLMP48507 274 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 H2AFVQ71UI9 128 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 FAM186BQ8IYM0 893 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 C4orf32Q8N8J7 132 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 CCDC114Q96M63 670 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 FAM118BQ9BPY3 351 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 REEP2Q9BRK0 252 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 CUEDC2Q9H467 287 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 RIC8AQ9NPQ8 531 aa12.17□□□□□ -0.46
DDR1-239ENST00000452441 MKRN1Q9UHC7 482 aaKnown RBP12.17□□□□□ -0.46
DDR1-239ENST00000452441 PLCB3Q01970 1234 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 EPC2Q52LR7 807 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 XKR9Q5GH70 373 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 STRIP1Q5VSL9 837 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 PAPD7Q5XG87 772 aaKnown RBP12.16□□□□□ -0.46
DDR1-239ENST00000452441 THOC1Q96FV9 657 aaKnown RBP12.16□□□□□ -0.46
DDR1-239ENST00000452441 GLT8D2Q9H1C3 349 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 SH2D4AQ9H788 454 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 SNX12Q9UMY4 172 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
DDR1-239ENST00000452441 SEC24CP53992 1094 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 COG2Q14746 738 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 HP1BP3Q5SSJ5 553 aaPredicted RBP12.16□□□□□ -0.46
DDR1-239ENST00000452441 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 CCDC170Q8IYT3 715 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 ARL8AQ96BM9 186 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
DDR1-239ENST00000452441 STIM2Q9P246 746 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
DDR1-239ENST00000452441 KCNB1Q14721 858 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 CATSPER3Q86XQ3 398 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 UBE2TQ9NPD8 197 aaPredicted RBP12.16□□□□□ -0.46
DDR1-239ENST00000452441 ACP6Q9NPH0 428 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 MRPL11Q9Y3B7 192 aaKnown RBP12.16□□□□□ -0.46
DDR1-239ENST00000452441 PCNTO95613 3336 aa12.16□□□□□ -0.46
DDR1-239ENST00000452441 AFPP02771 609 aaKnown RBP12.15□□□□□ -0.46
DDR1-239ENST00000452441 PPP1R2P41236 205 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 PTK2Q05397 1052 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 IFT88Q13099 833 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 RASA3Q14644 834 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 ARHGEF16Q5VV41 709 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 OTUD6AQ7L8S5 288 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 RPGRIP1Q96KN7 1286 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 ZNF263O14978 683 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 FGGP02679 453 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 PPP1R7Q15435 360 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 TTC31Q49AM3 519 aaPredicted RBP12.15□□□□□ -0.46
DDR1-239ENST00000452441 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
DDR1-239ENST00000452441 CCDC105Q8IYK2 499 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 GUF1Q8N442 669 aaKnown RBP12.15□□□□□ -0.46
DDR1-239ENST00000452441 SPIRE2Q8WWL2 714 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.46
DDR1-239ENST00000452441 GGT7Q9UJ14 662 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 SALL4Q9UJQ4 1053 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 TISP43B9A030 160 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 CALCAP01258 141 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 VIMP08670 466 aaKnown RBP12.15□□□□□ -0.46
DDR1-239ENST00000452441 GCFC2P16383 781 aaKnown RBP12.15□□□□□ -0.46
DDR1-239ENST00000452441 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 PLCD4Q9BRC7 762 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 CAPN7Q9Y6W3 813 aa12.15□□□□□ -0.46
DDR1-239ENST00000452441 PAK2Q13177 524 aa12.14□□□□□ -0.47
DDR1-239ENST00000452441 HHIPL2Q6UWX4 724 aa12.14□□□□□ -0.47
DDR1-239ENST00000452441 ANKRD42Q8N9B4 389 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms