RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 C22orf23Q9BZE7 217 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 TSPYL2Q9H2G4 693 aaPredicted RBP14.12□□□□□ -0.15
CPSF4-208ENST00000452047 GABBR1Q9UBS5 961 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 TCEAL9Q9UHQ7 104 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 PADI3Q9ULW8 664 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 KIAA1671Q9BY89 1806 aa14.12□□□□□ -0.15
CPSF4-208ENST00000452047 ZNF862O60290 1169 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 PSMD10O75832 226 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 CDKL5O76039 1030 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 TDP2O95551 362 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 SKIV2LQ15477 1246 aaKnown RBP14.11□□□□□ -0.15
CPSF4-208ENST00000452047 Q4G0T1 1027 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 B3GNT9Q6UX72 402 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 RTN4RL1Q86UN2 441 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-208ENST00000452047 CKAP2LQ8IYA6 745 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 GJA10Q969M2 543 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 ZNF689Q96CS4 500 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-208ENST00000452047 MBOAT7Q96N66 472 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 PHF20Q9BVI0 1012 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 FTHL17Q9BXU8 183 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 SLKQ9H2G2 1235 aaPredicted RBP14.11□□□□□ -0.15
CPSF4-208ENST00000452047 DISC1Q9NRI5 854 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 ADGRA3Q8IWK6 1321 aa14.11□□□□□ -0.15
CPSF4-208ENST00000452047 GAS7O60861 476 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 CTDNEP1O95476 244 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 AK2P54819 239 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 PAK2Q13177 524 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 UGCGQ16739 394 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 LRCH2Q5VUJ6 765 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 MOXD1Q6UVY6 613 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 TMEM192Q8IY95 271 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 ETNPPLQ8TBG4 499 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 TMEM40Q8WWA1 233 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 FAM167AQ96KS9 214 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 TMX1Q9H3N1 280 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 UNC45AQ9H3U1 944 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 CDHR5Q9HBB8 845 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 KCNJ14Q9UNX9 436 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 SAMM50Q9Y512 469 aa14.1□□□□□ -0.15
CPSF4-208ENST00000452047 TCF20Q9UGU0 1960 aaKnown RBP14.1□□□□□ -0.15
CPSF4-208ENST00000452047 H3BNC9 293 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 CHMP2AO43633 222 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 DTNBO60941 627 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 DGKIO75912 1065 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 SFNP31947 248 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 JAK3P52333 1124 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 PRKCEQ02156 737 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 NONOQ15233 471 aaKnown RBP eCLIP14.09□□□□□ -0.15
CPSF4-208ENST00000452047 ANKRD1Q15327 319 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 TMEM266Q2M3C6 531 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 TRMT1LQ7Z2T5 733 aaKnown RBP14.09□□□□□ -0.15
CPSF4-208ENST00000452047 KRT25Q7Z3Z0 450 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 FIBCD1Q8N539 461 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 LINC01465Q8N7H1 131 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 ADAMTS19Q8TE59 1207 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 CLP1Q92989 425 aaKnown RBP14.09□□□□□ -0.15
CPSF4-208ENST00000452047 MRPL38Q96DV4 380 aaKnown RBP14.09□□□□□ -0.15
CPSF4-208ENST00000452047 TEKT3Q9BXF9 490 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 ERVK-5Q9HDB9 667 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 GJB4Q9NTQ9 266 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 COG5Q9UP83 839 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 CEP131Q9UPN4 1083 aa14.09□□□□□ -0.15
CPSF4-208ENST00000452047 C5orf67F2Z3F1 127 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 SLC37A4O43826 429 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 GPR32O75388 356 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 LARGE1O95461 756 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 OATP04181 439 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 BMP1P13497 986 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 KCNQ1P51787 676 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 ME3Q16798 604 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 INF2Q27J81 1249 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 AAK1Q2M2I8 961 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 KIZQ2M2Z5 673 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 NPAS4Q8IUM7 802 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 RDM1Q8NG50 284 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 HLA-CQ95604 372 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 GINS2Q9Y248 185 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 NOC2LQ9Y3T9 749 aaKnown RBP14.08□□□□□ -0.16
CPSF4-208ENST00000452047 C5orf42Q9H799 3197 aa14.08□□□□□ -0.16
CPSF4-208ENST00000452047 FNDC1Q4ZHG4 1894 aaPredicted RBP14.08□□□□□ -0.16
CPSF4-208ENST00000452047 MAGEB2O15479 319 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 MGEA5O60502 916 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 RPS6KA5O75582 802 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 SEC24BO95487 1268 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 VTNP04004 478 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 FDPSP14324 419 aaKnown RBP14.07□□□□□ -0.16
CPSF4-208ENST00000452047 CLCN3P51790 818 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 CRYBB1P53674 252 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-208ENST00000452047 GPM6BQ13491 265 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 FAM43BQ6ZT52 329 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-208ENST00000452047 METTL13Q8N6R0 699 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 OXER1Q8TDS5 423 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 GTF3C6Q969F1 213 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 PPP1R16BQ96T49 567 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 OSMRQ99650 979 aa14.07□□□□□ -0.16
CPSF4-208ENST00000452047 ORC3Q9UBD5 711 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-208ENST00000452047 DDX25Q9UHL0 483 aaKnown RBP14.07□□□□□ -0.16
CPSF4-208ENST00000452047 STBD1O95210 358 aa14.06□□□□□ -0.16
CPSF4-208ENST00000452047 RB1P06400 928 aa14.06□□□□□ -0.16
CPSF4-208ENST00000452047 XBP1P17861 261 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms