RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 MAGEB2O15479 319 aa24.8■■□□□ 1.56
CPSF7-208ENST00000450000 TMOD1P28289 359 aa24.8■■□□□ 1.56
CPSF7-208ENST00000450000 SFNP31947 248 aa24.8■■□□□ 1.56
CPSF7-208ENST00000450000 JAK3P52333 1124 aa24.8■■□□□ 1.56
CPSF7-208ENST00000450000 TIGD5Q53EQ6 642 aa24.8■■□□□ 1.56
CPSF7-208ENST00000450000 RIT2Q99578 217 aa24.8■■□□□ 1.56
CPSF7-208ENST00000450000 ADGRA3Q8IWK6 1321 aa24.8■■□□□ 1.56
CPSF7-208ENST00000450000 KDM3AQ9Y4C1 1321 aa24.8■■□□□ 1.56
CPSF7-208ENST00000450000 DENND3A2RUS2 1198 aa24.79■■□□□ 1.56
CPSF7-208ENST00000450000 MSH4O15457 936 aa24.79■■□□□ 1.56
CPSF7-208ENST00000450000 RB1P06400 928 aa24.79■■□□□ 1.56
CPSF7-208ENST00000450000 KCNQ1P51787 676 aa24.79■■□□□ 1.56
CPSF7-208ENST00000450000 FAM43BQ6ZT52 329 aaPredicted RBP24.79■■□□□ 1.56
CPSF7-208ENST00000450000 NPAS4Q8IUM7 802 aa24.79■■□□□ 1.56
CPSF7-208ENST00000450000 MAP7D2Q96T17 732 aa24.79■■□□□ 1.56
CPSF7-208ENST00000450000 C11orf84Q9BUA3 381 aaPredicted RBP24.79■■□□□ 1.56
CPSF7-208ENST00000450000 PRRC2BQ5JSZ5 2229 aaKnown RBP24.79■■□□□ 1.56
CPSF7-208ENST00000450000 GPR182O15218 404 aa24.78■■□□□ 1.56
CPSF7-208ENST00000450000 ANAPC15P60006 121 aa24.78■■□□□ 1.56
CPSF7-208ENST00000450000 NONOQ15233 471 aaKnown RBP eCLIP24.78■■□□□ 1.56
CPSF7-208ENST00000450000 TMEM266Q2M3C6 531 aa24.78■■□□□ 1.56
CPSF7-208ENST00000450000 KRT25Q7Z3Z0 450 aa24.78■■□□□ 1.56
CPSF7-208ENST00000450000 KIAA0319LQ8IZA0 1049 aa24.78■■□□□ 1.56
CPSF7-208ENST00000450000 PPP1R16BQ96T49 567 aa24.78■■□□□ 1.56
CPSF7-208ENST00000450000 CCDC194A0A1B0GVG4 234 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 BMP1P13497 986 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 ATP4AP20648 1035 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 Q4G0T1 1027 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 EP400NLQ6ZTU2 488 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 MIER3Q7Z3K6 550 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 BANK1Q8NDB2 785 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 LENG9Q96B70 501 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 SCLT1Q96NL6 688 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 AKT3Q9Y243 479 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 PCDHB7Q9Y5E2 793 aa24.77■■□□□ 1.56
CPSF7-208ENST00000450000 PRUNE2Q8WUY3 3088 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 MARCH6O60337 910 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 DGKIO75912 1065 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 C22orf31O95567 290 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 OATP04181 439 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 BMPR1AP36894 532 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 CRYBB1P53674 252 aaPredicted RBP24.76■■□□□ 1.55
CPSF7-208ENST00000450000 SCRN1Q12765 414 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 KIZQ2M2Z5 673 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 DAGLBQ8NCG7 672 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 WASF1Q92558 559 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 SLC5A5Q92911 643 aa24.76■■□□□ 1.55
CPSF7-208ENST00000450000 CENPBP07199 599 aaPredicted RBP24.75■■□□□ 1.55
CPSF7-208ENST00000450000 EFCAB12Q6NXP0 572 aa24.75■■□□□ 1.55
CPSF7-208ENST00000450000 CMTR2Q8IYT2 770 aaKnown RBP24.75■■□□□ 1.55
CPSF7-208ENST00000450000 RDM1Q8NG50 284 aa24.75■■□□□ 1.55
CPSF7-208ENST00000450000 AIFM3Q96NN9 605 aa24.75■■□□□ 1.55
CPSF7-208ENST00000450000 OSMRQ99650 979 aa24.75■■□□□ 1.55
CPSF7-208ENST00000450000 UNC45AQ9H3U1 944 aa24.75■■□□□ 1.55
CPSF7-208ENST00000450000 UBE2ZQ9H832 354 aaPredicted RBP24.75■■□□□ 1.55
CPSF7-208ENST00000450000 C1orf112Q9NSG2 853 aa24.75■■□□□ 1.55
CPSF7-208ENST00000450000 DDX25Q9UHL0 483 aaKnown RBP24.75■■□□□ 1.55
CPSF7-208ENST00000450000 ST3GAL5Q9UNP4 418 aa24.75■■□□□ 1.55
CPSF7-208ENST00000450000 KCNJ14Q9UNX9 436 aa24.75■■□□□ 1.55
CPSF7-208ENST00000450000 NOC2LQ9Y3T9 749 aaKnown RBP24.75■■□□□ 1.55
CPSF7-208ENST00000450000 TDP2O95551 362 aa24.74■■□□□ 1.55
CPSF7-208ENST00000450000 VTNP04004 478 aa24.74■■□□□ 1.55
CPSF7-208ENST00000450000 PRKCEQ02156 737 aa24.74■■□□□ 1.55
CPSF7-208ENST00000450000 LETM2Q2VYF4 491 aa24.74■■□□□ 1.55
CPSF7-208ENST00000450000 PAN2Q504Q3 1202 aaKnown RBP24.74■■□□□ 1.55
CPSF7-208ENST00000450000 SPOUT1Q5T280 376 aaKnown RBP24.74■■□□□ 1.55
CPSF7-208ENST00000450000 RTN4RL1Q86UN2 441 aaPredicted RBP24.74■■□□□ 1.55
CPSF7-208ENST00000450000 ZNF710Q8N1W2 664 aa24.74■■□□□ 1.55
CPSF7-208ENST00000450000 LINC01599Q8WXQ3 324 aa24.74■■□□□ 1.55
CPSF7-208ENST00000450000 LMAN2LQ9H0V9 348 aa24.74■■□□□ 1.55
CPSF7-208ENST00000450000 NSUN3Q9H649 340 aaKnown RBP24.74■■□□□ 1.55
CPSF7-208ENST00000450000 CHD7Q9P2D1 2997 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 ZBTB42B2RXF5 422 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 PFKFB2O60825 505 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 KCNA5P22460 613 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 SARSP49591 514 aaKnown RBP24.73■■□□□ 1.55
CPSF7-208ENST00000450000 CLCN3P51790 818 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 TBC1D8BQ0IIM8 1120 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 INF2Q27J81 1249 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 MOXD1Q6UVY6 613 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 ZNF689Q96CS4 500 aaPredicted RBP24.73■■□□□ 1.55
CPSF7-208ENST00000450000 ADAM2Q99965 735 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 PLVAPQ9BX97 442 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 CDHR5Q9HBB8 845 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 BRMS1Q9HCU9 246 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 ERVK-5Q9HDB9 667 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 TPCN1Q9ULQ1 816 aa24.73■■□□□ 1.55
CPSF7-208ENST00000450000 COL4A4P53420 1690 aaPredicted RBP24.72■■□□□ 1.55
CPSF7-208ENST00000450000 STK36Q9NRP7 1315 aa24.72■■□□□ 1.55
CPSF7-208ENST00000450000 CYP3A7-CYP3A51PA0A087WV96 503 aa24.72■■□□□ 1.55
CPSF7-208ENST00000450000 C5orf67F2Z3F1 127 aa24.72■■□□□ 1.55
CPSF7-208ENST00000450000 CYP3A7P24462 503 aa24.72■■□□□ 1.55
CPSF7-208ENST00000450000 GJA10Q969M2 543 aa24.72■■□□□ 1.55
CPSF7-208ENST00000450000 NECAB3Q96P71 396 aaPredicted RBP24.72■■□□□ 1.55
CPSF7-208ENST00000450000 NAP1L4Q99733 375 aaKnown RBP24.72■■□□□ 1.55
CPSF7-208ENST00000450000 ORC3Q9UBD5 711 aaPredicted RBP24.72■■□□□ 1.55
CPSF7-208ENST00000450000 SEPT9Q9UHD8 586 aaPredicted RBP24.72■■□□□ 1.55
CPSF7-208ENST00000450000 SIP14410 1827 aa24.71■■□□□ 1.55
CPSF7-208ENST00000450000 PSMD10O75832 226 aa24.71■■□□□ 1.55
CPSF7-208ENST00000450000 CSPG5O95196 566 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms