RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 RUSC1Q9BVN2 902 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 DPH5Q9H2P9 285 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 AMACRQ9UHK6 382 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 PGRMC1O00264 195 aaKnown RBP12.35□□□□□ -0.43
SYVN1-204ENST00000449943 PPEF1O14829 653 aaPredicted RBP12.35□□□□□ -0.43
SYVN1-204ENST00000449943 GYS1P13807 737 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 HOXA7P31268 230 aaPredicted RBP12.35□□□□□ -0.43
SYVN1-204ENST00000449943 HOXD13P35453 343 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 IFI16Q16666 785 aaKnown RBP12.35□□□□□ -0.43
SYVN1-204ENST00000449943 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
SYVN1-204ENST00000449943 FRMD5Q7Z6J6 570 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 VPS36Q86VN1 386 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 KSR1Q8IVT5 923 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 CYP2W1Q8TAV3 490 aa12.35□□□□□ -0.43
SYVN1-204ENST00000449943 CDK5RAP2Q96SN8 1893 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 FAM86B1E9PN63 330 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 FAM86B2P0C5J1 330 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 CTNNA1P35221 906 aaKnown RBP12.34□□□□□ -0.43
SYVN1-204ENST00000449943 KDM7AQ6ZMT4 941 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 AFF2P51816 1311 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 E7EVH7 732 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 H0YHG0 523 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 SART1O43290 800 aaKnown RBP12.34□□□□□ -0.43
SYVN1-204ENST00000449943 H2AFZP0C0S5 128 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 ADRA2BP18089 450 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 HSD17B3P37058 310 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 H2AFVQ71UI9 128 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 TPCN2Q8NHX9 752 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 CELF4Q9BZC1 486 aaKnown RBP12.34□□□□□ -0.43
SYVN1-204ENST00000449943 NEUROG2Q9H2A3 272 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 MEIS2O14770 477 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 CTTNQ14247 550 aaKnown RBP12.34□□□□□ -0.43
SYVN1-204ENST00000449943 EFCC1Q9HA90 598 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 GCOM1H8Y6P7 765 aaPredicted RBP12.34□□□□□ -0.43
SYVN1-204ENST00000449943 DAPK3O43293 454 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 MYZAPP0CAP1 466 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 SPATA31C1P0DKV0 1188 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 OTUD6BQ8N6M0 293 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 PBKQ96KB5 322 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 ISCUQ9H1K1 167 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 CAPN7Q9Y6W3 813 aa12.34□□□□□ -0.43
SYVN1-204ENST00000449943 PITPNM2Q9BZ72 1349 aa12.33□□□□□ -0.43
SYVN1-204ENST00000449943 RXRBP28702 533 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 EPHA7Q15375 998 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 CERKLQ49MI3 558 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-204ENST00000449943 KIAA0825Q8IV33 1275 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 KAT2BQ92831 832 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 BCS1LQ9Y276 419 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 MYH7BA7E2Y1 1941 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 FRMD3A2A2Y4 597 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 NMT1P30419 496 aaKnown RBP12.33□□□□□ -0.44
SYVN1-204ENST00000449943 FLT3P36888 993 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 ZC2HC1CQ53FD0 456 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-204ENST00000449943 MYCT1Q8N699 235 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 SYT2Q8N9I0 419 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-204ENST00000449943 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.33□□□□□ -0.446e-7■■■□□ 14.7
SYVN1-204ENST00000449943 DNAJC18Q9H819 358 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 BZW2Q9Y6E2 419 aaKnown RBP12.33□□□□□ -0.44
SYVN1-204ENST00000449943 ASTN1O14525 1302 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 BACH1O14867 736 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 TTI1O43156 1089 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 PPP1R37O75864 691 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 FAM13AO94988 1023 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 RPL13P26373 211 aaKnown RBP12.33□□□□□ -0.44
SYVN1-204ENST00000449943 PLS1Q14651 629 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 B4GALNT4Q76KP1 1039 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 GLYCTKQ8IVS8 523 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 SPICE1Q8N0Z3 855 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 LRRC57Q8N9N7 239 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 COA1Q9GZY4 146 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 OSGEPQ9NPF4 335 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 PLCB1Q9NQ66 1216 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 FBXL5Q9UKA1 691 aa12.33□□□□□ -0.44
SYVN1-204ENST00000449943 RPA1P27694 616 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 COPB2P35606 906 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 HSPA9P38646 679 aaKnown RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 CYP2J2P51589 502 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 GTF2A1P52655 376 aaPredicted RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 UBXN2AP68543 259 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 HDLBPQ00341 1268 aaKnown RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 ICA1Q05084 483 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 SPIRE1Q08AE8 756 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 C10orf76Q5T2E6 689 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 MREGQ8N565 214 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 AMNQ9BXJ7 453 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 EPN3Q9H201 632 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 TYW1Q9NV66 732 aaKnown RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 NHSQ6T4R5 1651 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 DDX3XO00571 662 aaKnown RBP eCLIP12.32□□□□□ -0.446e-19■■■□□ 17.6
SYVN1-204ENST00000449943 PDXKO00764 312 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 PPIP5K2O43314 1243 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 DDR1Q08345 913 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms