RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 STK38Q15208 465 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 EPHA7Q15375 998 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 CATSPER3Q86XQ3 398 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 TPH2Q8IWU9 490 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 SLC43A3Q8NBI5 491 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 LRRC15Q8TF66 581 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 EPSTI1Q96J88 318 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 ZNF396Q96N95 335 aaPredicted RBP11.01□□□□□ -0.65
CCDC171-203ENST00000449575 PLIN2Q99541 437 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 CSRNP2Q9H175 543 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 ERAP1Q9NZ08 941 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 LRWD1Q9UFC0 647 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 TET1Q8NFU7 2136 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 ZBTB42B2RXF5 422 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 ARVCFO00192 962 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 SPTLC2O15270 562 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 CTIFO43310 598 aaKnown RBP11.01□□□□□ -0.65
CCDC171-203ENST00000449575 B4GALT4O60513 344 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 KPNA6O60684 536 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 PQBP1O60828 265 aaKnown RBP11.01□□□□□ -0.65
CCDC171-203ENST00000449575 IGBP1P78318 339 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 PRKCEQ02156 737 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 SLC20A2Q08357 652 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 ARL6IP4Q66PJ3 421 aaKnown RBP11.01□□□□□ -0.65
CCDC171-203ENST00000449575 PLA2G4FQ68DD2 849 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 POTEGQ6S5H5 508 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 PLPPR4Q7Z2D5 763 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 WNT8BQ93098 351 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 CGNQ9P2M7 1197 aaKnown RBP11.01□□□□□ -0.65
CCDC171-203ENST00000449575 ATP11BQ9Y2G3 1177 aa11.01□□□□□ -0.65
CCDC171-203ENST00000449575 CABYRO75952 493 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 INSRRP14616 1297 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 RTP1P59025 263 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 TLE2Q04725 743 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 SNX17Q15036 470 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 TMEM266Q2M3C6 531 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 ANO5Q75V66 913 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 CKAP2LQ8IYA6 745 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 PIGOQ8TEQ8 1089 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 LMBR1Q8WVP7 490 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 CEP131Q9UPN4 1083 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 SRPRBQ9Y5M8 271 aaKnown RBP11□□□□□ -0.65
CCDC171-203ENST00000449575 MYH11P35749 1972 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 TREHO43280 583 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 P4HBP07237 508 aaKnown RBP11□□□□□ -0.65
CCDC171-203ENST00000449575 QARSP47897 775 aaKnown RBP11□□□□□ -0.65
CCDC171-203ENST00000449575 NPEPPSP55786 919 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 PDIA5Q14554 519 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 ZRSR1Q15695 479 aaKnown RBP11□□□□□ -0.65
CCDC171-203ENST00000449575 MARCH8Q5T0T0 291 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 KCNK18Q7Z418 384 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 SH3RF1Q7Z6J0 888 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 FAM126BQ8IXS8 530 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 C7orf31Q8N865 590 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 RDM1Q8NG50 284 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 LEO1Q8WVC0 666 aaPredicted RBP11□□□□□ -0.65
CCDC171-203ENST00000449575 GTF2IRD1Q9UHL9 959 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 RCOR1Q9UKL0 485 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 ZNF215Q9UL58 517 aaPredicted RBP11□□□□□ -0.65
CCDC171-203ENST00000449575 TRPC6Q9Y210 931 aa11□□□□□ -0.65
CCDC171-203ENST00000449575 YEATS4O95619 227 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 CYP2C9P11712 490 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 PSMC5P62195 406 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 ADAM17P78536 824 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-203ENST00000449575 SNX29Q8TEQ0 813 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 ATP8B4Q8TF62 1192 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 TSC1Q92574 1164 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 PNMA5Q96PV4 448 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 KATNAL1Q9BW62 490 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 BMP2KQ9NSY1 1161 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-203ENST00000449575 PCDHA7Q9UN72 937 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 GOLGA6L6A8MZA4 724 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 BMP15O95972 392 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 OATP04181 439 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 CCT6AP40227 531 aaKnown RBP10.99□□□□□ -0.65
CCDC171-203ENST00000449575 KRT85P78386 507 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 FAAP100Q0VG06 881 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 GRIK4Q16099 956 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 NFRKBQ6P4R8 1299 aa10.99□□□□□ -0.65
CCDC171-203ENST00000449575 SEPT9Q9UHD8 586 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-203ENST00000449575 UMODL1Q5DID0 1318 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 A0A087X0B3 334 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 CD4P01730 458 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 RPA1P27694 616 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 HOXC8P31273 242 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 PPFIA1Q13136 1202 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 GRB10Q13322 594 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 KARSQ15046 597 aaKnown RBP10.98□□□□□ -0.65
CCDC171-203ENST00000449575 SHC4Q6S5L8 630 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 RUFY4Q6ZNE9 571 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 CREBRFQ8IUR6 639 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 CNPY4Q8N129 248 aa10.98□□□□□ -0.65
CCDC171-203ENST00000449575 KRI1Q8N9T8 703 aaKnown RBP10.98□□□□□ -0.65
CCDC171-203ENST00000449575 SYMPKQ92797 1274 aaKnown RBP10.98□□□□□ -0.65
CCDC171-203ENST00000449575 SPATA32Q96LK8 384 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms