RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TUT1Q9H6E5 874 aaKnown RBP15.65■□□□□ 0.1
SHMT2-203ENST00000449049 PRDM10Q9NQV6 1147 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 KCND2Q9NZV8 630 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 ARHGEF35A5YM69 484 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 MYMKA6NI61 221 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 SSBP05455 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
SHMT2-203ENST00000449049 MARK3P27448 753 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 PURAQ00577 322 aaKnown RBP15.65■□□□□ 0.1
SHMT2-203ENST00000449049 CUL4BQ13620 913 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 ARSHQ5FYA8 562 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 GNASQ5JWF2 1037 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 RINT1Q6NUQ1 792 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 GPBP1Q86WP2 473 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 KAT2BQ92831 832 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 ARMC5Q96C12 935 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 PPME1Q9Y570 386 aa15.65■□□□□ 0.1
SHMT2-203ENST00000449049 HTTP42858 3142 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 HAS3O00219 553 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 ZEB2O60315 1214 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 MYL3P08590 195 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 CASP1P29466 404 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 NPEPPSP55786 919 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 MTFR1Q15390 333 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 TARBP2Q15633 366 aaKnown RBP15.64■□□□□ 0.09
SHMT2-203ENST00000449049 XKR9Q5GH70 373 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 C1orf186Q6ZWK4 172 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 TRMT1LQ7Z2T5 733 aaKnown RBP15.64■□□□□ 0.09
SHMT2-203ENST00000449049 SPATA20Q8TB22 786 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 CEP170P1Q96L14 293 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 CEP89Q96ST8 783 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 RUSC1Q9BVN2 902 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 BLZF1Q9H2G9 400 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 RNPEPQ9H4A4 650 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 CYP26B1Q9NR63 512 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-203ENST00000449049 HBP1O60381 514 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 LETM1O95202 739 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-203ENST00000449049 CCL5P13501 91 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 ZSCAN23Q3MJ62 389 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 NT5DC1Q5TFE4 455 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 PADI6Q6TGC4 694 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 RNF180Q86T96 592 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 DDX12PQ92771 950 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 ERCC4Q92889 916 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-203ENST00000449049 ZNF333Q96JL9 665 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 CCDC43Q96MW1 224 aaKnown RBP15.64■□□□□ 0.09
SHMT2-203ENST00000449049 KATNAL1Q9BW62 490 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 KIAA1468Q9P260 1216 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 TUBE1Q9UJT0 475 aa15.64■□□□□ 0.09
SHMT2-203ENST00000449049 MTERF2Q49AM1 385 aa15.63■□□□□ 0.09
SHMT2-203ENST00000449049 PCSK9Q8NBP7 692 aaKnown RBP15.63■□□□□ 0.09
SHMT2-203ENST00000449049 DNAJC19Q96DA6 116 aa15.63■□□□□ 0.09
SHMT2-203ENST00000449049 SH2D3AQ9BRG2 576 aa15.63■□□□□ 0.09
SHMT2-203ENST00000449049 TRPC6Q9Y210 931 aa15.63■□□□□ 0.09
SHMT2-203ENST00000449049 PCDHA5Q9Y5H7 936 aa15.63■□□□□ 0.09
SHMT2-203ENST00000449049 ZBTB42B2RXF5 422 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 GUCY2CP25092 1073 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 SARSP49591 514 aaKnown RBP15.62■□□□□ 0.09
SHMT2-203ENST00000449049 PSEN2P49810 448 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 LRRC41Q15345 812 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 MTG1Q9BT17 334 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-203ENST00000449049 RTN4Q9NQC3 1192 aaKnown RBP15.62■□□□□ 0.09
SHMT2-203ENST00000449049 BMP2KQ9NSY1 1161 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-203ENST00000449049 COL1A2P08123 1366 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 KLRC4O43908 158 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 DGAT1O75907 488 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 SMC2O95347 1197 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 GIT2Q14161 759 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 MFSD10Q14728 455 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 KCNA10Q16322 511 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 DYMQ7RTS9 669 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 SMARCE1Q969G3 411 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 REEP2Q9BRK0 252 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 TIPINQ9BVW5 301 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 RNF208Q9H0X6 261 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 PDLIM7Q9NR12 457 aa15.62■□□□□ 0.09
SHMT2-203ENST00000449049 NPHP3-ACAD11A0A0J9YXS1 232 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 FRMD3A2A2Y4 597 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 USO1O60763 962 aaKnown RBP15.61■□□□□ 0.09
SHMT2-203ENST00000449049 RPN1P04843 607 aaKnown RBP15.61■□□□□ 0.09
SHMT2-203ENST00000449049 ASGR1P07306 291 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 ASIC1P78348 528 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 KIAA0753Q2KHM9 967 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 ZNF484Q5JVG2 852 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 GSDMAQ96QA5 445 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 TSEN34Q9BSV6 310 aaKnown RBP15.61■□□□□ 0.09
SHMT2-203ENST00000449049 DHX33Q9H6R0 707 aaKnown RBP15.61■□□□□ 0.09
SHMT2-203ENST00000449049 ODF2LQ9ULJ1 636 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 PVALEFA0A1B0GWK0 134 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 MOXD2PA6NHM9 499 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 KRT18P05783 430 aaKnown RBP15.61■□□□□ 0.09
SHMT2-203ENST00000449049 INSRRP14616 1297 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 RFC5P40937 340 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 CXCL17Q6UXB2 119 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 UNC13DQ70J99 1090 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 ARRDC4Q8NCT1 418 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 DEFB118Q96PH6 123 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 ATP6V0A4Q9HBG4 840 aa15.61■□□□□ 0.09
SHMT2-203ENST00000449049 SCN10AQ9Y5Y9 1956 aa15.6■□□□□ 0.09
SHMT2-203ENST00000449049 SYCE3A1L190 88 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms