RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 IER5Q5VY09 327 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 HAUS3Q68CZ6 603 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 PSRC1Q6PGN9 363 aaPredicted RBP15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 METTL13Q8N6R0 699 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 ZBTB10Q96DT7 871 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 CCDC43Q96MW1 224 aaKnown RBP15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 NIFKQ9BYG3 293 aaKnown RBP15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 MTIF3Q9H2K0 278 aaKnown RBP15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 LRWD1Q9UFC0 647 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 KAT6AQ92794 2004 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 LTBP2Q14767 1821 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 ZBTB42B2RXF5 422 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 SLITRK3O94933 977 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 C22orf31O95567 290 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 FGBP02675 491 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 YWHABP31946 246 aaKnown RBP15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 EPHB4P54760 987 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 PDIA5Q14554 519 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 ARL6IP4Q66PJ3 421 aaKnown RBP15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 RPAINQ86UA6 219 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 NME8Q8N427 588 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 CEP170P1Q96L14 293 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 HSD17B14Q9BPX1 270 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 JPH2Q9BR39 696 aaPredicted RBP15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 TUFT1Q9NNX1 390 aa15.69■□□□□ 0.1
GTF3C3-206ENST00000448539 MYH9P35579 1960 aaKnown RBP15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 ACTN1P12814 892 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 SF3A1Q15459 793 aaKnown RBP15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 SHHQ15465 462 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 LRIT3Q3SXY7 679 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 FOXD4L5Q5VV16 416 aaPredicted RBP15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 PLA2G4FQ68DD2 849 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 ZNF365Q70YC5 407 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 ANO5Q75V66 913 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 EXOC8Q8IYI6 725 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 FOXD4L4Q8WXT5 416 aaPredicted RBP15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 RNPC3Q96LT9 517 aaKnown RBP15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 MAP7D2Q96T17 732 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.68■□□□□ 0.11e-9■■□□□ 11.6
GTF3C3-206ENST00000448539 POLR3CQ9BUI4 534 aaPredicted RBP15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 SUGCTQ9HAC7 445 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 WRAP73Q9P2S5 460 aaPredicted RBP15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 PPME1Q9Y570 386 aa15.68■□□□□ 0.1
GTF3C3-206ENST00000448539 LAMA2P24043 3122 aaKnown RBP15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 TMEM150BA6NC51 233 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 VWA3AA6NCI4 1184 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 STBD1O95210 358 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 LYPLA2O95372 231 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 ZSCAN22P10073 491 aaPredicted RBP15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 RPA1P27694 616 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 CCT6AP40227 531 aaKnown RBP15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 DNM2P50570 870 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 NPEPPSP55786 919 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 MRPS6P82932 125 aaKnown RBP15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 TARBP2Q15633 366 aaKnown RBP15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 XKR9Q5GH70 373 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 FAM26DQ5JW98 314 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 TMEM240Q5SV17 173 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 C9orf50Q5SZB4 431 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 KRT79Q5XKE5 535 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 FAM173BQ6P4H8 233 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 SLC7A3Q8WY07 619 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 ZNF396Q96N95 335 aaPredicted RBP15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 SH2D3AQ9BRG2 576 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 CYP26B1Q9NR63 512 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 AKT3Q9Y243 479 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 TRPV2Q9Y5S1 764 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 CDY2AQ9Y6F7 541 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 COL6A3P12111 3177 aa15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 TRIP12Q14669 1992 aaPredicted RBP15.67■□□□□ 0.1
GTF3C3-206ENST00000448539 ZBBXA8MT70 800 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 NBNO60934 754 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 MED24O75448 989 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 F13A1P00488 732 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 RFC5P40937 340 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 CLCN3P51790 818 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 POLGP54098 1239 aaPredicted RBP15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 CEBPZQ03701 1054 aaKnown RBP15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 TMEM62Q0P6H9 643 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 TRAF7Q6Q0C0 670 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 C16orf59Q7L2K0 433 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 OTOP2Q7RTS6 562 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 CATSPER3Q86XQ3 398 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 KIAA0319LQ8IZA0 1049 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 LRRC71Q8N4P6 559 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 IGSF22Q8N9C0 903 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 SNX29Q8TEQ0 813 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 NACC1Q96RE7 527 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 ANKEF1Q9NU02 776 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 GINS2Q9Y248 185 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 CLIC4Q9Y696 253 aa15.66■□□□□ 0.1
GTF3C3-206ENST00000448539 CHRNA1P02708 482 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 CXCL10P02778 98 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 SPATA31C1P0DKV0 1188 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 XRCC6P12956 609 aaKnown RBP eCLIP15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 MUTP22033 750 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 MGAT3Q09327 533 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 IL17AQ16552 155 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms