RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 DACT2Q5SW24 774 aa7.4□□□□□ -1.22
USP49-205ENST00000448078 SPPL2CQ8IUH8 684 aa7.4□□□□□ -1.22
USP49-205ENST00000448078 PHAXQ9H814 394 aaKnown RBP7.4□□□□□ -1.22
USP49-205ENST00000448078 ZCCHC17Q9NP64 241 aaKnown RBP7.4□□□□□ -1.22
USP49-205ENST00000448078 GPR160Q9UJ42 338 aa7.4□□□□□ -1.22
USP49-205ENST00000448078 NUP98P52948 1817 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 ZNF609O15014 1411 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 CCL15-CCL14A0A0B4J2E2 113 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 LRRC10BA6NIK2 292 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 DDX58O95786 925 aaKnown RBP7.39□□□□□ -1.23
USP49-205ENST00000448078 TFRCP02786 760 aaKnown RBP7.39□□□□□ -1.23
USP49-205ENST00000448078 ANXA1P04083 346 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 GJB1P08034 283 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 CETPP11597 493 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 ATF4P18848 351 aaPredicted RBP7.39□□□□□ -1.23
USP49-205ENST00000448078 TRHRP34981 398 aaPredicted RBP7.39□□□□□ -1.23
USP49-205ENST00000448078 IGHMBP2P38935 993 aaKnown RBP7.39□□□□□ -1.23
USP49-205ENST00000448078 RIPK4P57078 832 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 ERVFC1P60507 584 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 PPP2R5DQ14738 602 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 MLANAQ16655 118 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 CCL15Q16663 113 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 FYB2Q5VWT5 728 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 LARP1BQ659C4 914 aaKnown RBP7.39□□□□□ -1.23
USP49-205ENST00000448078 CRTC3Q6UUV7 619 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 DEFB123Q8N688 67 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 PDZD8Q8NEN9 1154 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 ADCY4Q8NFM4 1077 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 SH3TC2Q8TF17 1288 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 ISCA1Q9BUE6 129 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 NOL6Q9H6R4 1146 aaKnown RBP7.39□□□□□ -1.23
USP49-205ENST00000448078 VEZTQ9HBM0 779 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 STXBP5LQ9Y2K9 1186 aa7.39□□□□□ -1.23
USP49-205ENST00000448078 A0A1W2PQ27 194 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 A0A1W2PQ64 194 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 A0A1W2PQC6 194 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 A0A1W2PQD8 194 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 A0A1W2PQH9 124 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 FITM1A5D6W6 292 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 TLR2O60603 784 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 USP2O75604 605 aaPredicted RBP7.38□□□□□ -1.23
USP49-205ENST00000448078 GLI1P08151 1106 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 PPP2R1AP30153 589 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 CCT4P50991 539 aaKnown RBP7.38□□□□□ -1.23
USP49-205ENST00000448078 CHRNEQ04844 493 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 PROSER3Q2NL68 480 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 AXDND1Q5T1B0 1012 aaPredicted RBP7.38□□□□□ -1.23
USP49-205ENST00000448078 VHLLQ6RSH7 139 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 PPFIBP1Q86W92 1011 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 CCDC191Q8NCU4 936 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 OPTNQ96CV9 577 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 CLMNQ96JQ2 1002 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 ZDHHC15Q96MV8 337 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 MPHOSPH8Q99549 860 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 CWC25Q9NXE8 425 aaPredicted RBP7.38□□□□□ -1.23
USP49-205ENST00000448078 FAM53CQ9NYF3 392 aa7.38□□□□□ -1.23
USP49-205ENST00000448078 ZNF214Q9UL59 606 aaPredicted RBP7.38□□□□□ -1.23
USP49-205ENST00000448078 SF3B6Q9Y3B4 125 aaKnown RBP7.38□□□□□ -1.23
USP49-205ENST00000448078 LAS1LQ9Y4W2 734 aaKnown RBP7.38□□□□□ -1.23
USP49-205ENST00000448078 PPM1BO75688 479 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 FARP2O94887 1054 aaPredicted RBP7.37□□□□□ -1.23
USP49-205ENST00000448078 PCCAP05165 728 aaPredicted RBP7.37□□□□□ -1.23
USP49-205ENST00000448078 GSNP06396 782 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 GSTM1P09488 218 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 HOXB7P09629 217 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 CD247P20963 164 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 ENDOUP21128 410 aaKnown RBP7.37□□□□□ -1.23
USP49-205ENST00000448078 PSMC4P43686 418 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 LACTBP83111 547 aaPredicted RBP7.37□□□□□ -1.23
USP49-205ENST00000448078 TEKQ02763 1124 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 SNAPC2Q13487 334 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 PKN1Q16512 942 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 KIAA1211LQ6NV74 962 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 CEP128Q6ZU80 1094 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 FIBCD1Q8N539 461 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 ANKS4BQ8N8V4 417 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 LIN37Q96GY3 246 aaPredicted RBP7.37□□□□□ -1.23
USP49-205ENST00000448078 SHDQ96IW2 340 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 DIRC2Q96SL1 478 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 SLC38A3Q99624 504 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 GP6Q9HCN6 339 aa7.37□□□□□ -1.23
USP49-205ENST00000448078 COL1A1P02452 1464 aaPredicted RBP7.36□□□□□ -1.23
USP49-205ENST00000448078 SIPA1L3O60292 1781 aaPredicted RBP7.36□□□□□ -1.23
USP49-205ENST00000448078 MED23Q9ULK4 1368 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 ZGLP1P0C6A0 271 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 CCL5P13501 91 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 NOP2P46087 812 aaKnown RBP7.36□□□□□ -1.23
USP49-205ENST00000448078 NEXNQ0ZGT2 675 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 RASA3Q14644 834 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 LRP10Q7Z4F1 713 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 KSR1Q8IVT5 923 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 SIRT2Q8IXJ6 389 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 C19orf47Q8N9M1 422 aaKnown RBP7.36□□□□□ -1.23
USP49-205ENST00000448078 FGD4Q96M96 766 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 HAUS7Q99871 368 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 PTPN18Q99952 460 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 ACTR10Q9NZ32 417 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 CHPF2Q9P2E5 772 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 STAP2Q9UGK3 403 aa7.36□□□□□ -1.23
USP49-205ENST00000448078 SRRDQ9UH36 339 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms