RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 TXKP42681 527 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 PSMC5P62195 406 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 DEFB103AP81534 67 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 LPIN1Q14693 890 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 ZNF174Q15697 407 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 TMCO2Q7Z6W1 182 aaPredicted RBP28.08■■■□□ 2.09
UFD1-204ENST00000447868 NKX2-4Q9H2Z4 354 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 SEMA6BQ9H3T3 888 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 MTMR10Q9NXD2 777 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 YBX2Q9Y2T7 364 aaKnown RBP28.08■■■□□ 2.09
UFD1-204ENST00000447868 TRPV2Q9Y5S1 764 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 PTPRSQ13332 1948 aa28.08■■■□□ 2.09
UFD1-204ENST00000447868 TMEM150BA6NC51 233 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 MYOGP15173 224 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 SPIRE1Q08AE8 756 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 XKR3Q5GH77 459 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 MCTP1Q6DN14 999 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 KIAA0319LQ8IZA0 1049 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 NME8Q8N427 588 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 PHOSPHO2Q8TCD6 241 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 IFIH1Q9BYX4 1025 aaKnown RBP28.07■■■□□ 2.08
UFD1-204ENST00000447868 TMEM60Q9H2L4 133 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 PCDHA12Q9UN75 941 aa28.07■■■□□ 2.08
UFD1-204ENST00000447868 MICAL3Q7RTP6 2002 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 DDX11L8A8MPP1 907 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 EFCAB14O75071 495 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 STBD1O95210 358 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 U2AF2P26368 475 aaKnown RBP eCLIP28.06■■■□□ 2.083e-8■■■■□ 20.2
UFD1-204ENST00000447868 QARSP47897 775 aaKnown RBP28.06■■■□□ 2.08
UFD1-204ENST00000447868 EPHA7Q15375 998 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 MTERF2Q49AM1 385 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 FBXO47Q5MNV8 452 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 TTC38Q5R3I4 469 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.06■■■□□ 2.08
UFD1-204ENST00000447868 HERC6Q8IVU3 1022 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 MTMR9Q96QG7 549 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 PPP1R16BQ96T49 567 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 SH2D3AQ9BRG2 576 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 CELF4Q9BZC1 486 aaKnown RBP28.06■■■□□ 2.08
UFD1-204ENST00000447868 TTC12Q9H892 705 aaPredicted RBP28.06■■■□□ 2.08
UFD1-204ENST00000447868 NOL7Q9UMY1 257 aaKnown RBP28.06■■■□□ 2.08
UFD1-204ENST00000447868 GINS2Q9Y248 185 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 PCDHA11Q9Y5I1 949 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 LOXHD1Q8IVV2 1947 aa28.06■■■□□ 2.08
UFD1-204ENST00000447868 H3BQV1 296 aa28.05■■■□□ 2.08
UFD1-204ENST00000447868 MAGEB2O15479 319 aa28.05■■■□□ 2.08
UFD1-204ENST00000447868 P4HBP07237 508 aaKnown RBP28.05■■■□□ 2.08
UFD1-204ENST00000447868 CLCN3P51790 818 aa28.05■■■□□ 2.08
UFD1-204ENST00000447868 EFCAB12Q6NXP0 572 aa28.05■■■□□ 2.08
UFD1-204ENST00000447868 LRRC71Q8N4P6 559 aa28.05■■■□□ 2.08
UFD1-204ENST00000447868 NIFKQ9BYG3 293 aaKnown RBP28.05■■■□□ 2.08
UFD1-204ENST00000447868 RGL1Q9NZL6 768 aa28.05■■■□□ 2.08
UFD1-204ENST00000447868 TMEM265A0A087WTH1 108 aa28.04■■■□□ 2.08
UFD1-204ENST00000447868 NBR1Q14596 966 aa28.04■■■□□ 2.08
UFD1-204ENST00000447868 TSHZ1Q6ZSZ6 1077 aa28.04■■■□□ 2.08
UFD1-204ENST00000447868 APBB2Q92870 758 aa28.04■■■□□ 2.08
UFD1-204ENST00000447868 DYDC2Q96IM9 177 aa28.04■■■□□ 2.08
UFD1-204ENST00000447868 GUCD1Q96NT3 240 aa28.04■■■□□ 2.08
UFD1-204ENST00000447868 ZNF576Q9H609 170 aa28.04■■■□□ 2.08
UFD1-204ENST00000447868 WRAP73Q9P2S5 460 aaPredicted RBP28.04■■■□□ 2.08
UFD1-204ENST00000447868 VTNP04004 478 aa28.03■■■□□ 2.08
UFD1-204ENST00000447868 CYP4A11Q02928 519 aa28.03■■■□□ 2.08
UFD1-204ENST00000447868 TBC1D8BQ0IIM8 1120 aa28.03■■■□□ 2.08
UFD1-204ENST00000447868 CUL4AQ13619 759 aa28.03■■■□□ 2.08
UFD1-204ENST00000447868 CTTNQ14247 550 aaKnown RBP28.03■■■□□ 2.08
UFD1-204ENST00000447868 TARBP2Q15633 366 aaKnown RBP28.03■■■□□ 2.08
UFD1-204ENST00000447868 PLA2G4FQ68DD2 849 aa28.03■■■□□ 2.08
UFD1-204ENST00000447868 LXNQ9BS40 222 aa28.03■■■□□ 2.08
UFD1-204ENST00000447868 ZBED2Q9BTP6 218 aa28.03■■■□□ 2.08
UFD1-204ENST00000447868 AGO3Q9H9G7 860 aaKnown RBP28.03■■■□□ 2.08
UFD1-204ENST00000447868 SUGCTQ9HAC7 445 aa28.03■■■□□ 2.08
UFD1-204ENST00000447868 DKC1O60832 514 aaKnown RBP eCLIP28.02■■■□□ 2.08
UFD1-204ENST00000447868 AMHP03971 560 aa28.02■■■□□ 2.08
UFD1-204ENST00000447868 CD52P31358 61 aa28.02■■■□□ 2.08
UFD1-204ENST00000447868 TRAPPC10P48553 1259 aa28.02■■■□□ 2.08
UFD1-204ENST00000447868 MKRN4PQ13434 485 aaPredicted RBP28.02■■■□□ 2.08
UFD1-204ENST00000447868 FAM117BQ6P1L5 589 aa28.02■■■□□ 2.08
UFD1-204ENST00000447868 ANO5Q75V66 913 aa28.02■■■□□ 2.08
UFD1-204ENST00000447868 MYOCDQ8IZQ8 938 aa28.02■■■□□ 2.08
UFD1-204ENST00000447868 SLC28A3Q9HAS3 691 aa28.02■■■□□ 2.08
UFD1-204ENST00000447868 CDHR5Q9HBB8 845 aa28.02■■■□□ 2.08
UFD1-204ENST00000447868 AKT3Q9Y243 479 aa28.02■■■□□ 2.08
UFD1-204ENST00000447868 TLL1O43897 1013 aa28.01■■■□□ 2.07
UFD1-204ENST00000447868 TMOD1P28289 359 aa28.01■■■□□ 2.07
UFD1-204ENST00000447868 ORC2Q13416 577 aaPredicted RBP28.01■■■□□ 2.07
UFD1-204ENST00000447868 KIZQ2M2Z5 673 aa28.01■■■□□ 2.07
UFD1-204ENST00000447868 LARP1BQ659C4 914 aaKnown RBP28.01■■■□□ 2.07
UFD1-204ENST00000447868 TPH2Q8IWU9 490 aa28.01■■■□□ 2.07
UFD1-204ENST00000447868 MAP7D2Q96T17 732 aa28.01■■■□□ 2.07
UFD1-204ENST00000447868 EIF2AK1Q9BQI3 630 aaKnown RBP28.01■■■□□ 2.07
UFD1-204ENST00000447868 KDM3AQ9Y4C1 1321 aa28■■■□□ 2.07
UFD1-204ENST00000447868 POTEMA6NI47 508 aa28■■■□□ 2.07
UFD1-204ENST00000447868 CA3P07451 260 aa28■■■□□ 2.07
UFD1-204ENST00000447868 OR52Z1P0C646 297 aa28■■■□□ 2.07
UFD1-204ENST00000447868 TOB1P50616 345 aaPredicted RBP28■■■□□ 2.07
UFD1-204ENST00000447868 LINC01465Q8N7H1 131 aa28■■■□□ 2.07
UFD1-204ENST00000447868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.99■■■□□ 2.07
UFD1-204ENST00000447868 SLITRK3O94933 977 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 NPEPPSP55786 919 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 PAK2Q13177 524 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms