RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 GNAT1P11488 350 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 MUTP22033 750 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 CDC25AP30304 524 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 PRKCEQ02156 737 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 GRIN1Q05586 938 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 TPRNQ4KMQ1 711 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 XKR3Q5GH77 459 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 SPECC1Q5M775 1068 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 CATSPER3Q86XQ3 398 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 C4orf19Q8IY42 314 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 KCTD17Q8N5Z5 321 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 ATP8B4Q8TF62 1192 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
LINC00408-201ENST00000447784 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 NACC1Q96RE7 527 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 TRMT13Q9NUP7 481 aaKnown RBP12.95□□□□□ -0.34
LINC00408-201ENST00000447784 KIAA1024Q9UPX6 916 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 DNM3Q9UQ16 869 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 MYH6P13533 1939 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 MED24O75448 989 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 XRCC6P12956 609 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC00408-201ENST00000447784 CSF2RAP15509 400 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 YWHABP31946 246 aaKnown RBP12.94□□□□□ -0.34
LINC00408-201ENST00000447784 CYP2C18P33260 490 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 PPFIA1Q13136 1202 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 PLCB4Q15147 1175 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 UGCGQ16739 394 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 ZNF484Q5JVG2 852 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 ADALQ6DHV7 355 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
LINC00408-201ENST00000447784 PYM1Q9BRP8 204 aaKnown RBP12.94□□□□□ -0.34
LINC00408-201ENST00000447784 CCSER1Q9C0I3 900 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 RNPEPQ9H4A4 650 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 IL23AQ9NPF7 189 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
LINC00408-201ENST00000447784 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
LINC00408-201ENST00000447784 GTF2IRD1Q9UHL9 959 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 NOD1Q9Y239 953 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 LTBP2Q14767 1821 aa12.94□□□□□ -0.34
LINC00408-201ENST00000447784 UMODL1Q5DID0 1318 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 NRCAMQ92823 1304 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 IGSF9BQ9UPX0 1349 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 C17orf102A2RUQ5 167 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 RRN3P2A6NIE6 340 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 LYPLA2O95372 231 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 SMIM10L2AP0DMW4 78 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 SMIM10L2BP0DMW5 78 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 CYP2C9P11712 490 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 CMA1P23946 247 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 IGBP1P78318 339 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 SMAD3P84022 425 aaKnown RBP12.93□□□□□ -0.34
LINC00408-201ENST00000447784 PTGISQ16647 500 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 XKR9Q5GH70 373 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 TMEM240Q5SV17 173 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 RRAGBQ5VZM2 374 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 GDF6Q6KF10 455 aaPredicted RBP12.93□□□□□ -0.34
LINC00408-201ENST00000447784 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
LINC00408-201ENST00000447784 POTEGQ6S5H5 508 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 CCDC73Q6ZRK6 1079 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 C16orf59Q7L2K0 433 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 EPSTI1Q96J88 318 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 CEP170P1Q96L14 293 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 RNPC3Q96LT9 517 aaKnown RBP12.93□□□□□ -0.34
LINC00408-201ENST00000447784 PLIN2Q99541 437 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC00408-201ENST00000447784 WNT8AQ9H1J5 351 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 ANKEF1Q9NU02 776 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 HDAC6Q9UBN7 1215 aa12.93□□□□□ -0.34
LINC00408-201ENST00000447784 A0A1W2PQ27 194 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 A0A1W2PQ64 194 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 A0A1W2PQD8 194 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 ARHGEF35A5YM69 484 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 ZNF862O60290 1169 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 SSBP05455 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC00408-201ENST00000447784 PFKMP08237 780 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 INSRRP14616 1297 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 ATP4AP20648 1035 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 STAT6P42226 847 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 CCL23P55773 120 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 RBL2Q08999 1139 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 BFSP2Q13515 415 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 KARSQ15046 597 aaKnown RBP12.92□□□□□ -0.34
LINC00408-201ENST00000447784 AXDND1Q5T1B0 1012 aaPredicted RBP12.92□□□□□ -0.34
LINC00408-201ENST00000447784 RASIP1Q5U651 963 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 FAM109BQ6ICB4 259 aaPredicted RBP12.92□□□□□ -0.34
LINC00408-201ENST00000447784 SHC4Q6S5L8 630 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 RPUSD2Q8IZ73 545 aaKnown RBP12.92□□□□□ -0.34
LINC00408-201ENST00000447784 CCDC155Q8N6L0 562 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 CAGE1Q8TC20 777 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 PIGOQ8TEQ8 1089 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 MRPS27Q92552 414 aaKnown RBP12.92□□□□□ -0.34
LINC00408-201ENST00000447784 CTAGE1Q96RT6 745 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
LINC00408-201ENST00000447784 NIFKQ9BYG3 293 aaKnown RBP12.92□□□□□ -0.34
LINC00408-201ENST00000447784 PANK2Q9BZ23 570 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 SETD4Q9NVD3 440 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 PPME1Q9Y570 386 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms