RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 MAGEB2O15479 319 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 C22orf31O95567 290 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 DNAJB2P25686 324 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 U2AF2P26368 475 aaKnown RBP eCLIP11.38□□□□□ -0.592e-7■□□□□ 10.6
CTDSPL-207ENST00000447745 MCM7P33993 719 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 TXKP42681 527 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 QARSP47897 775 aaKnown RBP11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 WDR5P61964 334 aaKnown RBP11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 PSMC5P62195 406 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 LPIN1Q14693 890 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 ZNF174Q15697 407 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 XKR3Q5GH77 459 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 FBXO47Q5MNV8 452 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 NCAPH2Q6IBW4 605 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 METTL13Q8N6R0 699 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 BANK1Q8NDB2 785 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 TIFAQ96CG3 184 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 MTMR9Q96QG7 549 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 SLC9A7Q96T83 725 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 NIFKQ9BYG3 293 aaKnown RBP11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 CELF4Q9BZC1 486 aaKnown RBP11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 TMEM60Q9H2L4 133 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 TTYH1Q9H313 450 aaPredicted RBP11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 TTC12Q9H892 705 aaPredicted RBP11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 MSRAQ9UJ68 235 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 TRPV2Q9Y5S1 764 aa11.38□□□□□ -0.59
CTDSPL-207ENST00000447745 M0QZ92 97 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 DKC1O60832 514 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 EFCAB14O75071 495 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 GHRP10912 638 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 MYOGP15173 224 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 DEFB103AP81534 67 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 SPIRE1Q08AE8 756 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 CUL4AQ13619 759 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 TARBP2Q15633 366 aaKnown RBP11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 RAB30Q15771 203 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 MTERF2Q49AM1 385 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 TTC38Q5R3I4 469 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 MCTP1Q6DN14 999 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 EFCAB12Q6NXP0 572 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 HERC6Q8IVU3 1022 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 DYDC2Q96IM9 177 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 IFIH1Q9BYX4 1025 aaKnown RBP11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 NKX2-4Q9H2Z4 354 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 RGL1Q9NZL6 768 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 SEPT9Q9UHD8 586 aaPredicted RBP11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 NOL7Q9UMY1 257 aaKnown RBP11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 YBX2Q9Y2T7 364 aaKnown RBP11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 PCDHA11Q9Y5I1 949 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 CHD9Q3L8U1 2897 aa11.37□□□□□ -0.59
CTDSPL-207ENST00000447745 EVPLQ92817 2033 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 TMEM265A0A087WTH1 108 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 TMEM150BA6NC51 233 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 H3BQV1 296 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 SLITRK3O94933 977 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 TMOD1P28289 359 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 TRAPPC10P48553 1259 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 TOB1P50616 345 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 CLCN3P51790 818 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 TBC1D8BQ0IIM8 1120 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 ORC2Q13416 577 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 CTTNQ14247 550 aaKnown RBP11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 LARP1BQ659C4 914 aaKnown RBP11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 ANO5Q75V66 913 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 TMCO2Q7Z6W1 182 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 LRRC71Q8N4P6 559 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 LINC01465Q8N7H1 131 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 USP38Q8NB14 1042 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 APBB2Q92870 758 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 CEP89Q96ST8 783 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 SH2D3AQ9BRG2 576 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 ZBED2Q9BTP6 218 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 ZNF576Q9H609 170 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 AGO3Q9H9G7 860 aaKnown RBP11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 SUGCTQ9HAC7 445 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 WRAP73Q9P2S5 460 aaPredicted RBP11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 GINS2Q9Y248 185 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 SQORQ9Y6N5 450 aa11.36□□□□□ -0.59
CTDSPL-207ENST00000447745 KDM3AQ9Y4C1 1321 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 ENPP3O14638 875 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 AMHP03971 560 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 VTNP04004 478 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 CD52P31358 61 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 TECP42680 631 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 CYP4A11Q02928 519 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 MKRN4PQ13434 485 aaPredicted RBP11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 NBR1Q14596 966 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 PLA2G4FQ68DD2 849 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 FAM117BQ6P1L5 589 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 TSHZ1Q6ZSZ6 1077 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 TPH2Q8IWU9 490 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 C4orf19Q8IY42 314 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 C4orf32Q8N8J7 132 aa11.35□□□□□ -0.59
CTDSPL-207ENST00000447745 GUCD1Q96NT3 240 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms