RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 TRIM50Q86XT4 487 aa10.59□□□□□ -0.71
NPHP1-207ENST00000445609 LENG1Q96BZ8 264 aaPredicted RBP10.59□□□□□ -0.71
NPHP1-207ENST00000445609 NIFKQ9BYG3 293 aaKnown RBP10.59□□□□□ -0.71
NPHP1-207ENST00000445609 ERAP1Q9NZ08 941 aa10.59□□□□□ -0.71
NPHP1-207ENST00000445609 RHOBTB3O94955 611 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 GUCY2CP25092 1073 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 GRK4P32298 578 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 CPT1AP50416 773 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 CCDC65Q8IXS2 484 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 ATP8B4Q8TF62 1192 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 BBXQ8WY36 941 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-207ENST00000445609 SH2D3AQ9BRG2 576 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 REEP2Q9BRK0 252 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 CYP26B1Q9NR63 512 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 EXOC1Q9NV70 894 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 PANK4Q9NVE7 773 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 PCNTO95613 3336 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 RARBP10826 455 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 BMP6P22004 513 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 MARK3P27448 753 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 CCND3P30281 292 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-207ENST00000445609 DPCR1Q3MIW9 517 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 GAS2L3Q86XJ1 694 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 C16orf70Q9BSU1 422 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 GTPBP4Q9BZE4 634 aaKnown RBP10.58□□□□□ -0.72
NPHP1-207ENST00000445609 ZNF215Q9UL58 517 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-207ENST00000445609 PTCH2Q9Y6C5 1203 aa10.58□□□□□ -0.72
NPHP1-207ENST00000445609 USO1O60763 962 aaKnown RBP10.57□□□□□ -0.72
NPHP1-207ENST00000445609 CAVIN2O95810 425 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 CACNB1Q02641 598 aaPredicted RBP10.57□□□□□ -0.72
NPHP1-207ENST00000445609 GSE1Q14687 1217 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 PLCB4Q15147 1175 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 ANO6Q4KMQ2 910 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 ZNF658Q5TYW1 1059 aaPredicted RBP10.57□□□□□ -0.72
NPHP1-207ENST00000445609 MLKLQ8NB16 471 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 TIPINQ9BVW5 301 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 SPC25Q9HBM1 224 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 ODF2LQ9ULJ1 636 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 COL4A3BPQ9Y5P4 624 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 FRMD3A2A2Y4 597 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 H3BRB1 525 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 TBCAO75347 108 aaKnown RBP10.57□□□□□ -0.72
NPHP1-207ENST00000445609 DGAT1O75907 488 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 INHAP05111 366 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 ZNF286BP0CG31 522 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 GJA9P57773 515 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 PSMD2Q13200 908 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 FSCN1Q16658 493 aaKnown RBP10.57□□□□□ -0.72
NPHP1-207ENST00000445609 MTERF2Q49AM1 385 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 HERC4Q5GLZ8 1057 aaPredicted RBP10.57□□□□□ -0.72
NPHP1-207ENST00000445609 NAT10Q9H0A0 1025 aaKnown RBP10.57□□□□□ -0.72
NPHP1-207ENST00000445609 DNAJC25Q9H1X3 360 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 RNPEPQ9H4A4 650 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 ZHX3Q9H4I2 956 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 TUT1Q9H6E5 874 aaKnown RBP10.57□□□□□ -0.72
NPHP1-207ENST00000445609 PTPN22Q9Y2R2 807 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 PPME1Q9Y570 386 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 CASP8AP2Q9UKL3 1982 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 DOCK5Q9H7D0 1870 aa10.57□□□□□ -0.72
NPHP1-207ENST00000445609 HBP1O60381 514 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 C6orf222P0C671 652 aaPredicted RBP10.56□□□□□ -0.72
NPHP1-207ENST00000445609 EHHADHQ08426 723 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 COASYQ13057 564 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 TARBP2Q15633 366 aaKnown RBP10.56□□□□□ -0.72
NPHP1-207ENST00000445609 UPF3AQ9H1J1 476 aaKnown RBP10.56□□□□□ -0.72
NPHP1-207ENST00000445609 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 DACH1Q9UI36 760 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 TRPC6Q9Y210 931 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 KPNA6O60684 536 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 HIP1RO75146 1068 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 FAM13AO94988 1023 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 GAP43P17677 238 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 RFC5P40937 340 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 NKX3-2P78367 333 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 IRX5P78411 483 aaPredicted RBP10.56□□□□□ -0.72
NPHP1-207ENST00000445609 BEX3Q00994 111 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 STK4Q13043 487 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 GNASQ5JWF2 1037 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 C11orf57Q6ZUT1 292 aaPredicted RBP10.56□□□□□ -0.72
NPHP1-207ENST00000445609 MAEAQ7L5Y9 396 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 MCPH1Q8NEM0 835 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 SLC7A3Q8WY07 619 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 PARVGQ9HBI0 331 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 HMX1Q9NP08 348 aaPredicted RBP10.56□□□□□ -0.72
NPHP1-207ENST00000445609 XPNPEP3Q9NQH7 507 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 PDLIM7Q9NR12 457 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 DDX20Q9UHI6 824 aaKnown RBP10.56□□□□□ -0.72
NPHP1-207ENST00000445609 SYNRGQ9UMZ2 1314 aa10.56□□□□□ -0.72
NPHP1-207ENST00000445609 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
NPHP1-207ENST00000445609 RSPH10B2B2RC85 870 aa10.55□□□□□ -0.72
NPHP1-207ENST00000445609 PGK1P00558 417 aa10.55□□□□□ -0.72
NPHP1-207ENST00000445609 RSPH10BP0C881 870 aa10.55□□□□□ -0.72
NPHP1-207ENST00000445609 ZNF165P49910 485 aa10.55□□□□□ -0.72
NPHP1-207ENST00000445609 ZNF131P52739 623 aa10.55□□□□□ -0.72
NPHP1-207ENST00000445609 POLGP54098 1239 aaPredicted RBP10.55□□□□□ -0.72
NPHP1-207ENST00000445609 CT47A1Q5JQC4 288 aaPredicted RBP10.55□□□□□ -0.72
NPHP1-207ENST00000445609 EXOC8Q8IYI6 725 aa10.55□□□□□ -0.72
NPHP1-207ENST00000445609 SMYD4Q8IYR2 804 aaPredicted RBP10.55□□□□□ -0.72
NPHP1-207ENST00000445609 MYCT1Q8N699 235 aa10.55□□□□□ -0.72
NPHP1-207ENST00000445609 HPS3Q969F9 1004 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms