RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 TRHP20396 242 aaPredicted RBP10.9□□□□□ -0.66
CASP4-203ENST00000444739 PDE6CP51160 858 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 COPS2P61201 443 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 MAP2K1Q02750 393 aaPredicted RBP10.9□□□□□ -0.66
CASP4-203ENST00000444739 ORC2Q13416 577 aaPredicted RBP10.9□□□□□ -0.66
CASP4-203ENST00000444739 SBK1Q52WX2 424 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 TNFAIP8L3Q5GJ75 292 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 ANKRD20A2Q5SQ80 823 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 ANKRD20A1Q5TYW2 823 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 ANKRD20A3Q5VUR7 823 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 ZDHHC24Q6UX98 284 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 DAAM2Q86T65 1068 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 TBCKQ8TEA7 893 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 PARD3BQ8TEW8 1205 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 PIGBQ92521 554 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 CDK5RAP3Q96JB5 506 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 ERP44Q9BS26 406 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 MOV10L1Q9BXT6 1211 aaKnown RBP10.9□□□□□ -0.66
CASP4-203ENST00000444739 FGFBP2Q9BYJ0 223 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 ARHGEF3Q9NR81 526 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 ADAM22Q9P0K1 906 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 ARPP21Q9UBL0 812 aaPredicted RBP10.9□□□□□ -0.66
CASP4-203ENST00000444739 GGT7Q9UJ14 662 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 ZBTB1Q9Y2K1 713 aa10.9□□□□□ -0.66
CASP4-203ENST00000444739 USP15Q9Y4E8 981 aaPredicted RBP10.9□□□□□ -0.66
CASP4-203ENST00000444739 BZW2Q9Y6E2 419 aaKnown RBP10.9□□□□□ -0.66
CASP4-203ENST00000444739 PHLPP1O60346 1717 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 RPTORQ8N122 1335 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 PALM3A6NDB9 673 aaPredicted RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 SPDYE3A6NKU9 549 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 ENO4A6NNW6 628 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 LINGO3P0C6S8 592 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 PRKCIP41743 596 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 IFNAR2P48551 515 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 NAPAP54920 295 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 DR1Q01658 176 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 TFAP4Q01664 338 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 SEPT2Q15019 361 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 CNGA2Q16280 664 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 TMEM119Q4V9L6 283 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 SUSD4Q5VX71 490 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 AP1ARQ63HQ0 302 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 ASRGL1Q7L266 308 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 ZC3H3Q8IXZ2 948 aaKnown RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 DHX37Q8IY37 1157 aaKnown RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 SYCE1Q8N0S2 351 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 SPDYE1Q8NFV5 336 aaPredicted RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 NUDT12Q9BQG2 462 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 TMEM109Q9BVC6 243 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 CRNKL1Q9BZJ0 848 aaKnown RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 GOPCQ9HD26 462 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 ATP8A2Q9NTI2 1148 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 CD2APQ9Y5K6 639 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 SMCO2A6NFE2 343 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 SMIM23A6NLE4 172 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 FLOT1O75955 427 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 ADAMTS2O95450 1211 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 MSH2P43246 934 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 NPEPPSP55786 919 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 KCNH2Q12809 1159 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 SLC29A2Q14542 456 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 CCDC152Q4G0S7 254 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 FAM26FQ5R3K3 315 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 C6orf118Q5T5N4 469 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 UBAP2Q5T6F2 1119 aaKnown RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 DCAF12L1Q5VU92 463 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 KIF2BQ8N4N8 673 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 GBP7Q8N8V2 638 aaPredicted RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 RBM46Q8TBY0 533 aaKnown RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 NSUN4Q96CB9 384 aaKnown RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 KLHL29Q96CT2 875 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 ZBTB10Q96DT7 871 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 SLC4A9Q96Q91 983 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 LRRC27Q9C0I9 530 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 CNOT7Q9UIV1 285 aaKnown RBP10.89□□□□□ -0.67
CASP4-203ENST00000444739 DAAM1Q9Y4D1 1078 aa10.89□□□□□ -0.67
CASP4-203ENST00000444739 LAMB2P55268 1798 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 GOLGA6L10A0A0M3HER8 536 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 POTEMA6NI47 508 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 WTIPA6NIX2 430 aaPredicted RBP10.88□□□□□ -0.67
CASP4-203ENST00000444739 KIAA0391O15091 583 aaKnown RBP10.88□□□□□ -0.67
CASP4-203ENST00000444739 DDX3YO15523 660 aaKnown RBP10.88□□□□□ -0.67
CASP4-203ENST00000444739 LUC7L3O95232 432 aaKnown RBP10.88□□□□□ -0.67
CASP4-203ENST00000444739 H2AFZP0C0S5 128 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 UCHL3P15374 230 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 SLC9A1P19634 815 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 ANXA13P27216 316 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 CALCRLQ16602 461 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 H2AFVQ71UI9 128 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 TBC1D16Q8TBP0 767 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 FBXO25Q8TCJ0 367 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 EPS8L3Q8TE67 593 aaKnown RBP10.88□□□□□ -0.67
CASP4-203ENST00000444739 SNX29Q8TEQ0 813 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 KCTD10Q9H3F6 313 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 ERVK-5Q9HDB9 667 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 AMFRQ9UKV5 643 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 INTUQ9ULD6 942 aa10.88□□□□□ -0.67
CASP4-203ENST00000444739 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.88□□□□□ -0.67
CASP4-203ENST00000444739 PCDHA2Q9Y5H9 948 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms