RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 ZNF844Q08AG5 666 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 SEPT2Q15019 361 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 ASTE1Q2TB18 679 aaPredicted RBP20.64■□□□□ 0.89
PMPCB-204ENST00000444457 ZNF772Q68DY9 489 aaPredicted RBP20.64■□□□□ 0.89
PMPCB-204ENST00000444457 PROM2Q8N271 834 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 RAPGEF5Q92565 580 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 NAP1L4Q99733 375 aaKnown RBP20.64■□□□□ 0.89
PMPCB-204ENST00000444457 RPSAP08865 295 aaKnown RBP20.64■□□□□ 0.89
PMPCB-204ENST00000444457 TMOD1P28289 359 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 ECHS1P30084 290 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 ALDH1B1P30837 517 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 CCNHP51946 323 aaPredicted RBP20.64■□□□□ 0.89
PMPCB-204ENST00000444457 UAP1Q16222 522 aaPredicted RBP20.64■□□□□ 0.89
PMPCB-204ENST00000444457 QRICH1Q2TAL8 776 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 ACCSLQ4AC99 568 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 AGBL2Q5U5Z8 902 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 CRELD2Q6UXH1 353 aaPredicted RBP20.64■□□□□ 0.89
PMPCB-204ENST00000444457 RUFY4Q6ZNE9 571 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 CCDC84Q86UT8 332 aaPredicted RBP20.64■□□□□ 0.89
PMPCB-204ENST00000444457 MYOCDQ8IZQ8 938 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 KIRREL3Q8IZU9 778 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 NT5C3AQ9H0P0 336 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 ISCUQ9H1K1 167 aa20.64■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L15C9J2P7 530 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L13C9JLJ4 530 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L11C9JVI0 530 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L18D6R9N7 530 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L22D6RA61 530 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L17D6RBQ6 530 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L19D6RCP7 530 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L20D6RJB6 530 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 PPIP5K2O43314 1243 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 RAD51CO43502 376 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L24Q0WX57 530 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 MSL1Q68DK7 614 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 USP17L6PQ6QN14 398 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 KRT27Q7Z3Y8 459 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 ANKRD13CQ8N6S4 541 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 INPP4AQ96PE3 977 aaPredicted RBP20.63■□□□□ 0.89
PMPCB-204ENST00000444457 GLT8D2Q9H1C3 349 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 MMRN2Q9H8L6 949 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 BUB1O43683 1085 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 ZCWPW2Q504Y3 356 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 ZDHHC15Q96MV8 337 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 PANK4Q9NVE7 773 aa20.63■□□□□ 0.89
PMPCB-204ENST00000444457 CNOT8Q9UFF9 292 aaKnown RBP20.63■□□□□ 0.89
PMPCB-204ENST00000444457 RAD21O60216 631 aa20.62■□□□□ 0.89
PMPCB-204ENST00000444457 RASSF7Q02833 373 aa20.62■□□□□ 0.89
PMPCB-204ENST00000444457 FAM26FQ5R3K3 315 aa20.62■□□□□ 0.89
PMPCB-204ENST00000444457 FAM196BA6NMK8 535 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 EEF2P13639 858 aaKnown RBP20.61■□□□□ 0.89
PMPCB-204ENST00000444457 SLC1A4P43007 532 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 TNNC1P63316 161 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 SHROOM1Q2M3G4 852 aaPredicted RBP20.61■□□□□ 0.89
PMPCB-204ENST00000444457 NLGN1Q8N2Q7 840 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 OR2W6PQ8NHA6 318 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 DCAF4Q8WV16 495 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 MKL1Q969V6 931 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 LRRC45Q96CN5 670 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 ANO3Q9BYT9 981 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 DBNDD1Q9H9R9 158 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 PCDHA1Q9Y5I3 950 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 LRRC53A6NM62 1247 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 RBAK-RBAKDNI3L0D1 243 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 DRD4P21917 467 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 CACNB3P54284 484 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 TCP10Q12799 353 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 RIPK1Q13546 671 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 CUL1Q13616 776 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 POTEAQ6S8J7 498 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 DHX36Q9H2U1 1008 aaKnown RBP20.61■□□□□ 0.89
PMPCB-204ENST00000444457 KCNMB3Q9NPA1 279 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 KCNQ5Q9NR82 932 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 NYAP2Q9P242 653 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 TMEM59LQ9UK28 342 aa20.61■□□□□ 0.89
PMPCB-204ENST00000444457 E9PMD0 336 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 CTNNA1P35221 906 aaKnown RBP20.6■□□□□ 0.89
PMPCB-204ENST00000444457 ERVK-9P63128 1117 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 FKBP3Q00688 224 aaKnown RBP20.6■□□□□ 0.89
PMPCB-204ENST00000444457 GFPT1Q06210 699 aaPredicted RBP20.6■□□□□ 0.89
PMPCB-204ENST00000444457 ARMC2Q8NEN0 867 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 ZNF483Q8TF39 744 aaPredicted RBP20.6■□□□□ 0.89
PMPCB-204ENST00000444457 BAP1Q92560 729 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 TMX4Q9H1E5 349 aaPredicted RBP20.6■□□□□ 0.89
PMPCB-204ENST00000444457 BMP2KQ9NSY1 1161 aaPredicted RBP20.6■□□□□ 0.89
PMPCB-204ENST00000444457 KIAA1024Q9UPX6 916 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 PCDHAC2Q9Y5I4 1007 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 SCN9AQ15858 1988 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 SSU72P8A0A1W2PR75 194 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 DDTLA6NHG4 134 aaPredicted RBP20.6■□□□□ 0.89
PMPCB-204ENST00000444457 BUB1BO60566 1050 aaPredicted RBP20.6■□□□□ 0.89
PMPCB-204ENST00000444457 ATP2C2O75185 946 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 USP11P51784 963 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 ICA1Q05084 483 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 CERKLQ49MI3 558 aaPredicted RBP20.6■□□□□ 0.89
PMPCB-204ENST00000444457 SLFN13Q68D06 897 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 RRAGAQ7L523 313 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 PODNQ7Z5L7 613 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 USP38Q8NB14 1042 aa20.6■□□□□ 0.89
PMPCB-204ENST00000444457 UIMC1Q96RL1 719 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms