RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 REXO1L1PQ8IX06 675 aa6.32□□□□□ -1.4
AC003001.1-201ENST00000443247 NXPE1Q8N323 547 aa6.32□□□□□ -1.4
AC003001.1-201ENST00000443247 PPM1KQ8N3J5 372 aa6.32□□□□□ -1.4
AC003001.1-201ENST00000443247 AJUBAQ96IF1 538 aa6.32□□□□□ -1.4
AC003001.1-201ENST00000443247 ORAI3Q9BRQ5 295 aa6.32□□□□□ -1.4
AC003001.1-201ENST00000443247 MTFR1LQ9H019 292 aa6.32□□□□□ -1.4
AC003001.1-201ENST00000443247 KATNBL1Q9H079 304 aa6.32□□□□□ -1.4
AC003001.1-201ENST00000443247 OR10A5Q9H207 317 aa6.32□□□□□ -1.4
AC003001.1-201ENST00000443247 ACSS2Q9NR19 701 aa6.32□□□□□ -1.4
AC003001.1-201ENST00000443247 ZNF536O15090 1300 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 GAS7O60861 476 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 PLATP00750 562 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 ZNF888P0CJ79 500 aaPredicted RBP6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 ATP2A2P16615 1042 aaKnown RBP6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 SLC9A1P19634 815 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 PTX3P26022 381 aaPredicted RBP6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 CD83Q01151 205 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 PCBP1Q15365 356 aaKnown RBP eCLIP6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 TBC1D10BQ4KMP7 808 aaPredicted RBP6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 KANK2Q63ZY3 851 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 SDE2Q6IQ49 451 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 CXXC5Q7LFL8 322 aaKnown RBP6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 OTOP2Q7RTS6 562 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 CALML6Q8TD86 181 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 FOXRED1Q96CU9 486 aaPredicted RBP6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 OXSMQ9NWU1 459 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 H2AFY2Q9P0M6 372 aaPredicted RBP6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 PTPN22Q9Y2R2 807 aa6.31□□□□□ -1.4
AC003001.1-201ENST00000443247 LAMTOR5O43504 91 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 B4GALT4O60513 344 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 CUTAO60888 179 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 IGSF3O75054 1194 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 F2P00734 622 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 ETV4P43268 484 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 KCNQ1P51787 676 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 RRADP55042 308 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 ALDH6A1Q02252 535 aaKnown RBP6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 DSG1Q02413 1049 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 USP10Q14694 798 aaKnown RBP6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 SURF1Q15526 300 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 SEPT7Q16181 437 aaKnown RBP6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 ARHGEF18Q6ZSZ5 1173 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 PRRT2Q7Z6L0 340 aaPredicted RBP6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 KIF18BQ86Y91 864 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 IFNL2Q8IZJ0 200 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 E2F7Q96AV8 911 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 ELF4Q99607 663 aaPredicted RBP6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 FOXB1Q99853 325 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 THG1LQ9NWX6 298 aaKnown RBP6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 FBXO10Q9UK96 956 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 CDC42EP3Q9UKI2 254 aa6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 CNOT11Q9UKZ1 510 aaKnown RBP6.3□□□□□ -1.4
AC003001.1-201ENST00000443247 PRLP01236 227 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 HMGCRP04035 888 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 CYP17A1P05093 508 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 TAF7LQ5H9L4 462 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 ESRP1Q6NXG1 681 aaKnown RBP6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 AHI1Q8N157 1196 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 CHTF18Q8WVB6 975 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 CARD11Q9BXL7 1154 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 ZDHHC5Q9C0B5 715 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 TOMM22Q9NS69 142 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 IFT57Q9NWB7 429 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 SPO11Q9Y5K1 396 aa6.29□□□□□ -1.4
AC003001.1-201ENST00000443247 A0A0G2JNJ9 132 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 UBA6A0AVT1 1052 aaPredicted RBP6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 GSG1L2A8MUP6 293 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 PDE8AO60658 829 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 MYCLP1P12525 358 aaPredicted RBP6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 APEX1P27695 318 aaKnown RBP6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 GYS2P54840 703 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 PPP2CBP62714 309 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 PPP2CAP67775 309 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 SLC6A3Q01959 620 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 ROM1Q03395 351 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 MOGSQ13724 837 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 ZNF568Q3ZCX4 644 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 GRAMD4Q6IC98 578 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 C16orf92Q96LL3 132 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 JADE2Q9NQC1 790 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 Q9UFV3 132 aa6.28□□□□□ -1.4
AC003001.1-201ENST00000443247 A0A087X0B3 334 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 K7ESM1 405 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 CNOT4O95628 575 aaKnown RBP6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 ITGB3P05106 788 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 HSD3B2P26439 372 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 RGS3P49796 1198 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 EPHB4P54760 987 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 EFEMP1Q12805 493 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 SART3Q15020 963 aaKnown RBP6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 EIF4HQ15056 248 aaKnown RBP6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 EPHA7Q15375 998 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 SPATS1Q496A3 300 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 PRAMEF9Q5VWM5 478 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 TMEM200BQ69YZ2 307 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 SLFN12LQ6IEE8 588 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 LIMS2Q7Z4I7 341 aa6.27□□□□□ -1.41
AC003001.1-201ENST00000443247 EFHBQ8N7U6 833 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms