RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 RFXAPO00287 272 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 GJB5O95377 273 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 OATP04181 439 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 KCNJ6P48051 423 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 JAK3P52333 1124 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 TAP1Q03518 808 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 ZNF484Q5JVG2 852 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 CKAP2LQ8IYA6 745 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 BANK1Q8NDB2 785 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 TMEM40Q8WWA1 233 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 SEPT8Q92599 483 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 PPP1R16BQ96T49 567 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 IFIH1Q9BYX4 1025 aaKnown RBP12.62□□□□□ -0.39
PRKD3-203ENST00000443187 CERS4Q9HA82 394 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 SLC28A3Q9HAS3 691 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 SH2B1Q9NRF2 756 aaPredicted RBP12.62□□□□□ -0.39
PRKD3-203ENST00000443187 EVPLQ92817 2033 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 LOXHD1Q8IVV2 1947 aa12.62□□□□□ -0.39
PRKD3-203ENST00000443187 GCFC2P16383 781 aaKnown RBP12.61□□□□□ -0.39
PRKD3-203ENST00000443187 CD52P31358 61 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 SFNP31947 248 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 CLCN3P51790 818 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 PPP2R5CQ13362 524 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 TARBP2Q15633 366 aaKnown RBP12.61□□□□□ -0.39
PRKD3-203ENST00000443187 PPP2R2DQ66LE6 453 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 RTN4RL1Q86UN2 441 aaPredicted RBP12.61□□□□□ -0.39
PRKD3-203ENST00000443187 MYOCDQ8IZQ8 938 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 LRRC71Q8N4P6 559 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 USP38Q8NB14 1042 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 FAM20AQ96MK3 541 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 CELF4Q9BZC1 486 aaKnown RBP12.61□□□□□ -0.39
PRKD3-203ENST00000443187 TMEM60Q9H2L4 133 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 TRPV2Q9Y5S1 764 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 MYO9BQ13459 2157 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 SPTBN5Q9NRC6 3674 aaKnown RBP12.61□□□□□ -0.39
PRKD3-203ENST00000443187 COL4A6Q14031 1691 aa12.61□□□□□ -0.39
PRKD3-203ENST00000443187 TLL1O43897 1013 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 VTNP04004 478 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 FOSL2P15408 326 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 DRP2Q13474 957 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 TMEM266Q2M3C6 531 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 TSHZ1Q6ZSZ6 1077 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 ANO5Q75V66 913 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 RSPH3Q86UC2 560 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
PRKD3-203ENST00000443187 FBXO18Q8NFZ0 1043 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 RDM1Q8NG50 284 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 TMX3Q96JJ7 454 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 C8orf76Q96K31 380 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 TMX1Q9H3N1 280 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 BRMS1Q9HCU9 246 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 KDM3AQ9Y4C1 1321 aa12.6□□□□□ -0.39
PRKD3-203ENST00000443187 ENPP3O14638 875 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 ZBTB39O15060 712 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 TBX3O15119 743 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 EFCAB14O75071 495 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 GPR32O75388 356 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 HTRA4P83105 476 aaPredicted RBP12.59□□□□□ -0.39
PRKD3-203ENST00000443187 TRIM29Q14134 588 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 KIZQ2M2Z5 673 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 IER5Q5VY09 327 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 PLA2G4FQ68DD2 849 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 METTL13Q8N6R0 699 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 MAFAQ8NHW3 353 aaPredicted RBP12.59□□□□□ -0.39
PRKD3-203ENST00000443187 APBB2Q92870 758 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 TNPO1Q92973 898 aaKnown RBP12.59□□□□□ -0.39
PRKD3-203ENST00000443187 TOP1MTQ969P6 601 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 ZNF668Q96K58 619 aaPredicted RBP12.59□□□□□ -0.39
PRKD3-203ENST00000443187 FAM167AQ96KS9 214 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 MTMR9Q96QG7 549 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 RAD9AQ99638 391 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 NIFKQ9BYG3 293 aaKnown RBP12.59□□□□□ -0.39
PRKD3-203ENST00000443187 BACH2Q9BYV9 841 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 RGL1Q9NZL6 768 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 PADI3Q9ULW8 664 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 GINS2Q9Y248 185 aa12.59□□□□□ -0.39
PRKD3-203ENST00000443187 NOC2LQ9Y3T9 749 aaKnown RBP12.59□□□□□ -0.39
PRKD3-203ENST00000443187 LINC01553A4QN01 128 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 MGEA5O60502 916 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 UPP2O95045 317 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 AMHP03971 560 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 NPEPPSP55786 919 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
PRKD3-203ENST00000443187 NBR1Q14596 966 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 MTERF2Q49AM1 385 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 XKR3Q5GH77 459 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 EFCAB12Q6NXP0 572 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 CRIPAKQ8N1N5 446 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 NME8Q8N427 588 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 SP7Q8TDD2 431 aaPredicted RBP12.58□□□□□ -0.4
PRKD3-203ENST00000443187 DYDC2Q96IM9 177 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 OSMRQ99650 979 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 ADAMTS10Q9H324 1103 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 RC3H2Q9HBD1 1191 aaKnown RBP12.58□□□□□ -0.4
PRKD3-203ENST00000443187 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 NRBP2Q9NSY0 501 aa12.58□□□□□ -0.4
PRKD3-203ENST00000443187 SEPT9Q9UHD8 586 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms