RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 LYPLA2O95372 231 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 BMP15O95972 392 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 CKBP12277 381 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 RPA1P27694 616 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 MAGEA10P43363 369 aaPredicted RBP17.95■□□□□ 0.46
USP39-205ENST00000442708 MDM2Q00987 491 aaPredicted RBP17.95■□□□□ 0.46
USP39-205ENST00000442708 DNM1Q05193 864 aaKnown RBP17.95■□□□□ 0.46
USP39-205ENST00000442708 RBL2Q08999 1139 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 SLC39A14Q15043 492 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 MTERF2Q49AM1 385 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 POTEGQ6S5H5 508 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 LINC00301Q8NCQ3 95 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 NEK9Q8TD19 979 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 SCLYQ96I15 445 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 TUFT1Q9NNX1 390 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 PCDHA2Q9Y5H9 948 aa17.95■□□□□ 0.46
USP39-205ENST00000442708 LOXHD1Q8IVV2 1947 aa17.94■□□□□ 0.46
USP39-205ENST00000442708 YWHABP31946 246 aaKnown RBP17.94■□□□□ 0.46
USP39-205ENST00000442708 CCT6AP40227 531 aaKnown RBP17.94■□□□□ 0.46
USP39-205ENST00000442708 EPHB4P54760 987 aa17.94■□□□□ 0.46
USP39-205ENST00000442708 GPNMBQ14956 572 aa17.94■□□□□ 0.46
USP39-205ENST00000442708 ZNF618Q5T7W0 954 aa17.94■□□□□ 0.46
USP39-205ENST00000442708 MFSD5Q6N075 450 aa17.94■□□□□ 0.46
USP39-205ENST00000442708 PIGOQ8TEQ8 1089 aa17.94■□□□□ 0.46
USP39-205ENST00000442708 DNAJB3Q8WWF6 145 aa17.94■□□□□ 0.46
USP39-205ENST00000442708 TNPO1Q92973 898 aaKnown RBP17.94■□□□□ 0.46
USP39-205ENST00000442708 ZNF396Q96N95 335 aaPredicted RBP17.94■□□□□ 0.46
USP39-205ENST00000442708 CLIC6Q96NY7 704 aa17.94■□□□□ 0.46
USP39-205ENST00000442708 OSBPL7Q9BZF2 842 aa17.94■□□□□ 0.46
USP39-205ENST00000442708 PITPNM1O00562 1244 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 CSF2RAP15509 400 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 THPOP40225 353 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 BFSP2Q13515 415 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 MBTPS1Q14703 1052 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 USP49Q70CQ1 688 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 LINC01465Q8N7H1 131 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 ERMNQ8TAM6 284 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 CAGE1Q8TC20 777 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 SNX29Q8TEQ0 813 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 GDF15Q99988 308 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 FAM49AQ9H0Q0 323 aaPredicted RBP17.93■□□□□ 0.46
USP39-205ENST00000442708 CSRNP2Q9H175 543 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 CYP26B1Q9NR63 512 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 MORC2Q9Y6X9 1032 aaPredicted RBP17.93■□□□□ 0.46
USP39-205ENST00000442708 TET1Q8NFU7 2136 aa17.93■□□□□ 0.46
USP39-205ENST00000442708 DKC1O60832 514 aaKnown RBP eCLIP17.92■□□□□ 0.46
USP39-205ENST00000442708 IQCF3P0C7M6 154 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 CLCN3P51790 818 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 MKRN4PQ13434 485 aaPredicted RBP17.92■□□□□ 0.46
USP39-205ENST00000442708 SPECC1Q5M775 1068 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 KCNK18Q7Z418 384 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 RPAINQ86UA6 219 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 KIAA0319LQ8IZA0 1049 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 LRRC71Q8N4P6 559 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 CEP170P1Q96L14 293 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 PNMA5Q96PV4 448 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 RAB34Q9BZG1 259 aa17.92■□□□□ 0.46
USP39-205ENST00000442708 SRPRBQ9Y5M8 271 aaKnown RBP17.92■□□□□ 0.46
USP39-205ENST00000442708 IGKV6-21A0A0C4DH24 114 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 SMIM35A0A1B0GVV1 85 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 YEATS4O95619 227 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 CHRNA1P02708 482 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 CTSHP09668 335 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 SELPP16109 830 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 LONP1P36776 959 aaKnown RBP17.91■□□□□ 0.46
USP39-205ENST00000442708 MGAT3Q09327 533 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 GRB10Q13322 594 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 DRP2Q13474 957 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 STK38Q15208 465 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 XKR9Q5GH70 373 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 KRT79Q5XKE5 535 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 HAUS3Q68CZ6 603 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 EFCAB12Q6NXP0 572 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 TAF2Q6P1X5 1199 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 LRRC8DQ7L1W4 858 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 C16orf59Q7L2K0 433 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 CCDC155Q8N6L0 562 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 RETREG2Q8NC44 543 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 LRRC15Q8TF66 581 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 ANKEF1Q9NU02 776 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 DDX19AQ9NUU7 478 aaKnown RBP17.91■□□□□ 0.46
USP39-205ENST00000442708 KIAA1024Q9UPX6 916 aa17.91■□□□□ 0.46
USP39-205ENST00000442708 SPTLC2O15270 562 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 MAGEB2O15479 319 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 NBNO60934 754 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 RARRES1P49788 294 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 FPGSQ05932 587 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 TBC1D8BQ0IIM8 1120 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 TMEM62Q0P6H9 643 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 FAM26DQ5JW98 314 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 HYIQ5T013 277 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 OTUD6AQ7L8S5 288 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 METTL13Q8N6R0 699 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 EPSTI1Q96J88 318 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 AK8Q96MA6 479 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 PLIN2Q99541 437 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 LBHD1Q9BQE6 289 aaPredicted RBP17.9■□□□□ 0.46
USP39-205ENST00000442708 PRO3102Q9H379 93 aa17.9■□□□□ 0.46
USP39-205ENST00000442708 DHX33Q9H6R0 707 aaKnown RBP17.9■□□□□ 0.46
USP39-205ENST00000442708 CDHR5Q9HBB8 845 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms