RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 RUSC1Q9BVN2 902 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 BCAS3Q9H6U6 928 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 SUFUQ9UMX1 484 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 JRKLQ9Y4A0 524 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 TRPM7Q96QT4 1865 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 FRMD3A2A2Y4 597 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 KLHL33A6NCF5 533 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 FAM155AB1AL88 458 aaPredicted RBP8.93□□□□□ -0.98
CCDC39-201ENST00000442201 SERPINC1P01008 464 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 UBA1P22314 1058 aaKnown RBP8.93□□□□□ -0.98
CCDC39-201ENST00000442201 FANCCQ00597 558 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 ZNF792Q3KQV3 632 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 MIS18BP1Q6P0N0 1132 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 DPP9Q86TI2 863 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 GUF1Q8N442 669 aaKnown RBP8.93□□□□□ -0.98
CCDC39-201ENST00000442201 MRFAP1L1Q96HT8 127 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 DBR1Q9UK59 544 aaKnown RBP8.93□□□□□ -0.98
CCDC39-201ENST00000442201 COL4A3BPQ9Y5P4 624 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 ADGRA2Q96PE1 1338 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 BICDL2A1A5D9 508 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 MYO1CO00159 1063 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 COBLO75128 1261 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 ZNF18P17022 549 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 CCNE1P24864 410 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 YWHABP31946 246 aaKnown RBP8.93□□□□□ -0.98
CCDC39-201ENST00000442201 UGCGQ16739 394 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 C1orf186Q6ZWK4 172 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.93□□□□□ -0.98
CCDC39-201ENST00000442201 P2RX5Q93086 422 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 ZFYVE28Q9HCC9 887 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 SAMSN1Q9NSI8 373 aaKnown RBP8.93□□□□□ -0.98
CCDC39-201ENST00000442201 GABBR1Q9UBS5 961 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 BACH1O14867 736 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 SORBS3O60504 671 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 TLR2O60603 784 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 FAM13AO94988 1023 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 GAP43P17677 238 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 RARRES1P49788 294 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 GRM1Q13255 1194 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 GRB14Q14449 540 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 HSP90AA4PQ58FG1 418 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 SWSAP1Q6NVH7 229 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 ABHD15Q6UXT9 468 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 ARMCX2Q7L311 632 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 ZNF467Q7Z7K2 595 aaPredicted RBP8.93□□□□□ -0.98
CCDC39-201ENST00000442201 DRC7Q8IY82 874 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 MYOCDQ8IZQ8 938 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 TRIM47Q96LD4 638 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 MLXIPQ9HAP2 919 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 ANKEF1Q9NU02 776 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 IFNKQ9P0W0 207 aa8.93□□□□□ -0.98
CCDC39-201ENST00000442201 SLC15A5A6NIM6 579 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 CBFA2T2O43439 604 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 GGPS1O95749 300 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 SUPT20HL2P0C7V6 817 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 PADI6Q6TGC4 694 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 METTL7BQ6UX53 244 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 OTUD6AQ7L8S5 288 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 CCDC91Q7Z6B0 441 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 FBXO16Q8IX29 292 aaPredicted RBP8.92□□□□□ -0.98
CCDC39-201ENST00000442201 SLC5A4Q9NY91 659 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 TBC1D7Q9P0N9 293 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 ODF2LQ9ULJ1 636 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 DIS3Q9Y2L1 958 aaKnown RBP8.92□□□□□ -0.98
CCDC39-201ENST00000442201 GOLGA6L6A8MZA4 724 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 FARP2O94887 1054 aaPredicted RBP8.92□□□□□ -0.98
CCDC39-201ENST00000442201 UBASH3AP57075 661 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 SPAG1Q07617 926 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 LRRC41Q15345 812 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 XKR9Q5GH70 373 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 TTI2Q6NXR4 508 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 TRMT1LQ7Z2T5 733 aaKnown RBP8.92□□□□□ -0.98
CCDC39-201ENST00000442201 SFR1Q86XK3 245 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 CCDC60Q8IWA6 550 aaPredicted RBP8.92□□□□□ -0.98
CCDC39-201ENST00000442201 SCFD2Q8WU76 684 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 ITFG2Q969R8 447 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 XPO4Q9C0E2 1151 aaKnown RBP8.92□□□□□ -0.98
CCDC39-201ENST00000442201 SYNGAP1Q96PV0 1343 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 TRIM49BA6NDI0 452 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 RSPH10B2B2RC85 870 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 ATG7O95352 703 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 TPM3P06753 285 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 RSPH10BP0C881 870 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 CDC25BP30305 580 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 TM4SF4P48230 202 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 PMS1P54277 932 aaKnown RBP8.92□□□□□ -0.98
CCDC39-201ENST00000442201 TTLL4Q14679 1199 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 LY6KQ17RY6 165 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 CDKAL1Q5VV42 579 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 CENPPQ6IPU0 288 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 C17orf99Q6UX52 265 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 ANKRD20A12PQ8NF67 263 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 PARVGQ9HBI0 331 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 VTA1Q9NP79 307 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 SEL1LQ9UBV2 794 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 PCDHA2Q9Y5H9 948 aa8.92□□□□□ -0.98
CCDC39-201ENST00000442201 LCTP09848 1927 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 ZNF862O60290 1169 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 ARIH2O95376 493 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 TXNP10599 105 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms