RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 NPAS4Q8IUM7 802 aa7.36□□□□□ -1.23
HDAC6-210ENST00000441703 RASGRP4Q8TDF6 673 aa7.36□□□□□ -1.23
HDAC6-210ENST00000441703 DDX1Q92499 740 aaKnown RBP7.36□□□□□ -1.23
HDAC6-210ENST00000441703 KIF1BPQ96EK5 621 aa7.36□□□□□ -1.23
HDAC6-210ENST00000441703 STRBPQ96SI9 672 aaKnown RBP7.36□□□□□ -1.23
HDAC6-210ENST00000441703 RANBP17Q9H2T7 1088 aaKnown RBP7.36□□□□□ -1.23
HDAC6-210ENST00000441703 TBC1D17Q9HA65 648 aa7.36□□□□□ -1.23
HDAC6-210ENST00000441703 TMEM260Q9NX78 707 aa7.36□□□□□ -1.23
HDAC6-210ENST00000441703 PUF60Q9UHX1 559 aaKnown RBP7.36□□□□□ -1.23
HDAC6-210ENST00000441703 DACH1Q9UI36 760 aa7.36□□□□□ -1.23
HDAC6-210ENST00000441703 ZMIZ1Q9ULJ6 1067 aa7.36□□□□□ -1.23
HDAC6-210ENST00000441703 CA14Q9ULX7 337 aa7.36□□□□□ -1.23
HDAC6-210ENST00000441703 SMG5Q9UPR3 1016 aaKnown RBP7.36□□□□□ -1.23
HDAC6-210ENST00000441703 USTQ9Y2C2 406 aa7.36□□□□□ -1.23
HDAC6-210ENST00000441703 SORBS3O60504 671 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 PPFIA4O75335 1185 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 PRDM1O75626 825 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 FGF18O76093 207 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 WEE2P0C1S8 567 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 SMIM10L2AP0DMW4 78 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 SMIM10L2BP0DMW5 78 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 ATP5JP18859 108 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 MX1P20591 662 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 PKP1Q13835 747 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 NONOQ15233 471 aaKnown RBP eCLIP7.35□□□□□ -1.23
HDAC6-210ENST00000441703 STXBP2Q15833 593 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 FAM26DQ5JW98 314 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 RNF20Q5VTR2 975 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 KIAA1841Q6NSI8 718 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 OTOP3Q7RTS5 596 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 RNF214Q8ND24 703 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 KIF18AQ8NI77 898 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 EMID1Q96A84 441 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-210ENST00000441703 SPATA33Q96N06 139 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 TCF25Q9BQ70 676 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 BOLA2Q9H3K6 86 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 TTC12Q9H892 705 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-210ENST00000441703 EPB41L4AQ9HCS5 686 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-210ENST00000441703 NGRNQ9NPE2 291 aaKnown RBP7.35□□□□□ -1.23
HDAC6-210ENST00000441703 WNT16Q9UBV4 365 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 RAB23Q9ULC3 237 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 STX8Q9UNK0 236 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 SIT1Q9Y3P8 196 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 MYH6P13533 1939 aa7.35□□□□□ -1.23
HDAC6-210ENST00000441703 KAT6AQ92794 2004 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-210ENST00000441703 VGLL3A8MV65 326 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 FSCN2O14926 492 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 LAMTOR5O43504 91 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 REC8O95072 547 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 ZIC2O95409 532 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-210ENST00000441703 HOXD8P13378 290 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-210ENST00000441703 PMLP29590 882 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 TDO2P48775 406 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 ARHGAP4P98171 946 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 APOBRQ0VD83 1088 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 KCNC3Q14003 757 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 ZNF528Q3MIS6 628 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 SYDE2Q5VT97 1194 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 IL31Q6EBC2 164 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 CASC1Q6TDU7 716 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 BTNL9Q6UXG8 535 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 CCDC149Q6ZUS6 474 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 RASGRP2Q7LDG7 609 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 TMC7Q7Z402 723 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 RSPH3Q86UC2 560 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 PLEKHM2Q8IWE5 1019 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 ZNF397Q8NF99 534 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-210ENST00000441703 CLEC4DQ8WXI8 215 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 GPR20Q99678 358 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 FTHL17Q9BXU8 183 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 RNPEPQ9H4A4 650 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 DZANK1Q9NVP4 752 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 LHX6Q9UPM6 363 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 PCDHGA2Q9Y5H1 932 aa7.34□□□□□ -1.23
HDAC6-210ENST00000441703 CCDC171Q6TFL3 1326 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 WDR19Q8NEZ3 1342 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 KRBA1A5PL33 1030 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 H3BRB1 525 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 NARSO43776 548 aaKnown RBP7.33□□□□□ -1.24
HDAC6-210ENST00000441703 TBC1D4O60343 1298 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 GNAT2P19087 354 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 SLC16A2P36021 539 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 SHC2P98077 582 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 TFAP4Q01664 338 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 CSTF1Q05048 431 aaKnown RBP7.33□□□□□ -1.24
HDAC6-210ENST00000441703 BMS1Q14692 1282 aaKnown RBP7.33□□□□□ -1.24
HDAC6-210ENST00000441703 LPIN1Q14693 890 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 TTC22Q5TAA0 569 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 ARHGEF16Q5VV41 709 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 UNQ6494/PRO21346Q6UXR6 183 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 TSHZ1Q6ZSZ6 1077 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 NSUN6Q8TEA1 469 aaKnown RBP7.33□□□□□ -1.24
HDAC6-210ENST00000441703 DCAF4Q8WV16 495 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 MRPS27Q92552 414 aaKnown RBP7.33□□□□□ -1.24
HDAC6-210ENST00000441703 APPBP2Q92624 585 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 IWS1Q96ST2 819 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 FUCA2Q9BTY2 467 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 TUT1Q9H6E5 874 aaKnown RBP7.33□□□□□ -1.24
HDAC6-210ENST00000441703 KCNK12Q9HB15 430 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms