RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 KAT6AQ92794 2004 aa20.54■□□□□ 0.88
SMPD4-210ENST00000441135 MYO9BQ13459 2157 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 LINC01553A4QN01 128 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 EPOPA6NHQ4 379 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 SLC37A4O43826 429 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 PSAPP07602 524 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 ORC2Q13416 577 aaPredicted RBP20.53■□□□□ 0.88
SMPD4-210ENST00000441135 CCDC85BQ15834 202 aaPredicted RBP20.53■□□□□ 0.88
SMPD4-210ENST00000441135 FBXO47Q5MNV8 452 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 TSHZ1Q6ZSZ6 1077 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 SP7Q8TDD2 431 aaPredicted RBP20.53■□□□□ 0.88
SMPD4-210ENST00000441135 TRAPPC12Q8WVT3 735 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 TOP1MTQ969P6 601 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 TGS1Q96RS0 853 aaKnown RBP20.53■□□□□ 0.88
SMPD4-210ENST00000441135 TSPYL2Q9H2G4 693 aaPredicted RBP20.53■□□□□ 0.88
SMPD4-210ENST00000441135 THEGQ9P2T0 379 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 SQORQ9Y6N5 450 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 MICAL3Q7RTP6 2002 aa20.53■□□□□ 0.88
SMPD4-210ENST00000441135 TRANK1O15050 2925 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 SMIM35A0A1B0GVV1 85 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.52■□□□□ 0.88
SMPD4-210ENST00000441135 RFXAPO00287 272 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 CCNT1O60563 726 aaKnown RBP20.52■□□□□ 0.88
SMPD4-210ENST00000441135 FOSBP53539 338 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 ERVK-21P61565 698 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 ZNF484Q5JVG2 852 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 SWSAP1Q6NVH7 229 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 MTHFD1LQ6UB35 978 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 NME8Q8N427 588 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 ZBTB10Q96DT7 871 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 YME1L1Q96TA2 773 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 COL25A1Q9BXS0 654 aaPredicted RBP20.52■□□□□ 0.88
SMPD4-210ENST00000441135 MAFBQ9Y5Q3 323 aaPredicted RBP20.52■□□□□ 0.88
SMPD4-210ENST00000441135 TRPV2Q9Y5S1 764 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 MTCH2Q9Y6C9 303 aa20.52■□□□□ 0.88
SMPD4-210ENST00000441135 IGSF9BQ9UPX0 1349 aa20.52■□□□□ 0.87
SMPD4-210ENST00000441135 COL4A6Q14031 1691 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 FAM205CA6NFA0 338 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 U2AF2P26368 475 aaKnown RBP eCLIP20.51■□□□□ 0.87
SMPD4-210ENST00000441135 TRAPPC10P48553 1259 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 GUCY1B3Q02153 619 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 GRB10Q13322 594 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 CKAP2LQ8IYA6 745 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 SLFN12Q8IYM2 578 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 MICALL1Q8N3F8 863 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 ATXN2LQ8WWM7 1075 aaKnown RBP20.51■□□□□ 0.87
SMPD4-210ENST00000441135 BBXQ8WY36 941 aaPredicted RBP20.51■□□□□ 0.87
SMPD4-210ENST00000441135 UIMC1Q96RL1 719 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 DISC1Q9NRI5 854 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 SMC3Q9UQE7 1217 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 SAMM50Q9Y512 469 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 MYH9P35579 1960 aaKnown RBP20.51■□□□□ 0.87
SMPD4-210ENST00000441135 KDM3AQ9Y4C1 1321 aa20.51■□□□□ 0.87
SMPD4-210ENST00000441135 KLRC1P26715 233 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 GJB2P29033 226 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 PPP2R5CQ13362 524 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 TJAP1Q5JTD0 557 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 FAM43BQ6ZT52 329 aaPredicted RBP20.5■□□□□ 0.87
SMPD4-210ENST00000441135 SPRED2Q7Z698 418 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 NOSTRINQ8IVI9 506 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 SYMPKQ92797 1274 aaKnown RBP20.5■□□□□ 0.87
SMPD4-210ENST00000441135 SNX21Q969T3 373 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 FAM167AQ96KS9 214 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 UNC45AQ9H3U1 944 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 CEP131Q9UPN4 1083 aa20.5■□□□□ 0.87
SMPD4-210ENST00000441135 WDR81Q562E7 1941 aa20.49■□□□□ 0.87
SMPD4-210ENST00000441135 RBAK-RBAKDNI3L0D1 243 aa20.49■□□□□ 0.87
SMPD4-210ENST00000441135 LPXNO60711 386 aa20.49■□□□□ 0.87
SMPD4-210ENST00000441135 BAG4O95429 457 aaKnown RBP20.49■□□□□ 0.87
SMPD4-210ENST00000441135 HAS1Q92839 578 aa20.49■□□□□ 0.87
SMPD4-210ENST00000441135 INTS4Q96HW7 963 aaKnown RBP20.49■□□□□ 0.87
SMPD4-210ENST00000441135 SAMD11Q96NU1 681 aa20.49■□□□□ 0.87
SMPD4-210ENST00000441135 FTHL17Q9BXU8 183 aa20.49■□□□□ 0.87
SMPD4-210ENST00000441135 CELF4Q9BZC1 486 aaKnown RBP20.49■□□□□ 0.87
SMPD4-210ENST00000441135 PRDM6Q9NQX0 595 aa20.49■□□□□ 0.87
SMPD4-210ENST00000441135 LMCD1Q9NZU5 365 aa20.49■□□□□ 0.87
SMPD4-210ENST00000441135 MTUS1Q9ULD2 1270 aa20.49■□□□□ 0.87
SMPD4-210ENST00000441135 NEMFO60524 1076 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 UPP2O95045 317 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 ATP4AP20648 1035 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 TMEM62Q0P6H9 643 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 MIER3Q7Z3K6 550 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 POTEDQ86YR6 584 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 GDPD5Q8WTR4 605 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 AGO3Q9H9G7 860 aaKnown RBP20.48■□□□□ 0.87
SMPD4-210ENST00000441135 SUGCTQ9HAC7 445 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 GABBR1Q9UBS5 961 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 VAV3Q9UKW4 847 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 SIP14410 1827 aa20.48■□□□□ 0.87
SMPD4-210ENST00000441135 ZBTB42B2RXF5 422 aa20.47■□□□□ 0.87
SMPD4-210ENST00000441135 K7ELQ4 463 aaPredicted RBP20.47■□□□□ 0.87
SMPD4-210ENST00000441135 C22orf31O95567 290 aa20.47■□□□□ 0.87
SMPD4-210ENST00000441135 CD52P31358 61 aa20.47■□□□□ 0.87
SMPD4-210ENST00000441135 PAK2Q13177 524 aa20.47■□□□□ 0.87
SMPD4-210ENST00000441135 GNL2Q13823 731 aaKnown RBP20.47■□□□□ 0.87
SMPD4-210ENST00000441135 FBXO22Q8NEZ5 403 aa20.47■□□□□ 0.87
SMPD4-210ENST00000441135 NOL7Q9UMY1 257 aaKnown RBP20.47■□□□□ 0.87
SMPD4-210ENST00000441135 COL4A4P53420 1690 aaPredicted RBP20.47■□□□□ 0.87
SMPD4-210ENST00000441135 ENPP3O14638 875 aa20.46■□□□□ 0.87
SMPD4-210ENST00000441135 MRPS5P82675 430 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms